| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4175 |
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| Symbol | |
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| ID | 8360348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5217147 |
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| End bp | 5218661 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966344 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003123833 |
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| Protein GI | 256423180 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.438263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0393106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCA GATCTCTTTT ACTCATAATT GCATTTCCGC TGCTTTTTGG CAGTTGTCTG
AAAGACGTGA ATCCCAGCGA TTCACTGACT ACCGGTACAC TGACGCAGAC GGCCCAGGGA
TTGAAACAGG CATTAAATGG TGCATATGCT TTATTTAAAG ATCACGTGGA ATTTAACGGT
ACCACCGATC TGAATAACAT GTACCTGCGG CAGTATTTTC AGATGAGCGA TTTCGCCAGC
GATGATATTG TGTGTGCACA GACGACCACA GATCCGCTGT ATTACAGCTT TTCGCTGAAT
CATACGCCTA CGCAGACAAA CAGCCGTTAT TTCTGGTATA TCTCCTACAA GATCATCAAT
GATGTCAATA CGGTTATCGA GGCAGCGGAA GCTGTCCAGA ACCCGGATGC CACCATTAAA
CAGCTGCTGG GAGAGTGTTA TTTTATGCGG GCTTTCTGTC ACTTCAATCT GGTAAAACTA
TATGCCCGCC CTTATACGGA GAACCCGGGT GCTGATGGTG TAATATTACG TACTTCCACC
AGCGATCCTT CTACCAAAGC CCGCTCCACC GTAGCAGAGG TCTATGCATC TGTGATTGCG
GATGCAGAGA AAGGCGCTTC GCTGATGCAG CAACAGCGTG GCGTACAATA CGCTTCACAG
GAAGCTGCCT GGGCATTATT ATCAAGAGCC TACTTATATA AAGGCGTGAA TGACAGCACG
ATCTACTATA GTGATAAGGT CATCAATTCA GGCCGGTTCG GTCTGACCGA TACAACAGGT
TTTAAGACCA TGTTTGCCAA TGCAACGGGC AGTAAAGAGA CGATCTTCTG TGTCGCGTTT
ACGACCGTGG ATGATTATGG TAAAGCGGGT TCTATCGCCT CTATGATCTA TTCTGATGGT
AACTCCGGAT GGGGAGAGGA GTTCGCTTCA CAATCGCTGC GCGATACTAT GTCGGCCTAT
ACGGAAGACG CCCGTTGGGC TTATATTCTT CCTTTAAAAG ATGGTAGCGG CAATTTGCAG
AAAAAGAACG GTATTGAGAC TTATTACATT ATGAAGTTCT CCGGACAAGC AGGTAGTCCT
ACGCTGAGTT CCCCCATCAT GTTCCGCCTG GCGGAGATGT ACCTGAACAG GGCAGAAGCG
AAAGCCAAGG CAGGGAATAG CACCGGGGCT TTAGACGACC TGGATATGAT ACGGAAGAAC
AGGGGATTAC AGCATGCCCT CTATGGGGGA AAAGTGCCGG CAGGTAAGAC GGCCCTGGAA
ACCGTACTAA AGGAAAGAAG GATTGAACTG GCTTTTGAAG GACACCGGGT GTATGACGTT
TATCGCAACA AACAGGTGAT GAACCGTACC TACTGGGGCT ACCACCTGCC AGGGCTGAAA
GAGTCTGATA TAGACCTTAG TAAACGTCCT GCGGGCTATG AGAATATGGT CATCAATCCG
GACAATAAAC GGGTGATCTA TTACATTCCC ATCGATGAAA TACAGACCAA TAAACTGTGT
TCACAGAATC CTTAA
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| Protein sequence | MTTRSLLLII AFPLLFGSCL KDVNPSDSLT TGTLTQTAQG LKQALNGAYA LFKDHVEFNG
TTDLNNMYLR QYFQMSDFAS DDIVCAQTTT DPLYYSFSLN HTPTQTNSRY FWYISYKIIN
DVNTVIEAAE AVQNPDATIK QLLGECYFMR AFCHFNLVKL YARPYTENPG ADGVILRTST
SDPSTKARST VAEVYASVIA DAEKGASLMQ QQRGVQYASQ EAAWALLSRA YLYKGVNDST
IYYSDKVINS GRFGLTDTTG FKTMFANATG SKETIFCVAF TTVDDYGKAG SIASMIYSDG
NSGWGEEFAS QSLRDTMSAY TEDARWAYIL PLKDGSGNLQ KKNGIETYYI MKFSGQAGSP
TLSSPIMFRL AEMYLNRAEA KAKAGNSTGA LDDLDMIRKN RGLQHALYGG KVPAGKTALE
TVLKERRIEL AFEGHRVYDV YRNKQVMNRT YWGYHLPGLK ESDIDLSKRP AGYENMVINP
DNKRVIYYIP IDEIQTNKLC SQNP
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