Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4165 |
Symbol | |
ID | 8360338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5197367 |
End bp | 5197900 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644966334 |
Product | Methyltransferase type 12 |
Protein accession | YP_003123823 |
Protein GI | 256423170 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.362232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0202921 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTGGA ATGAGCGATA TACAAAAGGA TTACCTGCCC TGGAAATACC AGACCCGTTT TTTGTAAAAA TGTATGAGGA GCATATCAGC AAGGAATTCC CCAACGGAGG GATTGCCTTA GATCTGGCAG CAGGTACCGG CAGGCATACG CTGTTCTTGT CAACAGACAA CTGGCAGGTC AGAGCAGTAG ATATTTCAGA TGTGGCCATG GAAAGACTGG CAGAGAAAGC GGCCGGTCGG CCGGTGCAGA CAATCTGTAC AGACCTGGCG GAATATGCTT TTCCCCAGGC AGCTTTCGAC CTGATCGTAC TGTATTATCA TTTTGACCGG GCACTGTTTG CTGCTGTCGG CAAAGCCCTG AAACCCGGCG GATTACTCAT CAGTAAACAG GCGGTAGGAA AACCAGTTAA TCCACACACC TTACAGGCAT ATGAACTATT ACAACTAACG GAAGGACTGG AACAAATCAG CTATGCGGAA AGACCTGTAA AGGAAAGGGG AGTAGCAGAA TATTTGGGTC GTAAACCTTT TTAA
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Protein sequence | MLWNERYTKG LPALEIPDPF FVKMYEEHIS KEFPNGGIAL DLAAGTGRHT LFLSTDNWQV RAVDISDVAM ERLAEKAAGR PVQTICTDLA EYAFPQAAFD LIVLYYHFDR ALFAAVGKAL KPGGLLISKQ AVGKPVNPHT LQAYELLQLT EGLEQISYAE RPVKERGVAE YLGRKPF
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