Gene Cpin_4165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4165 
Symbol 
ID8360338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5197367 
End bp5197900 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content48% 
IMG OID644966334 
ProductMethyltransferase type 12 
Protein accessionYP_003123823 
Protein GI256423170 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.362232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0202921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTGGA ATGAGCGATA TACAAAAGGA TTACCTGCCC TGGAAATACC AGACCCGTTT 
TTTGTAAAAA TGTATGAGGA GCATATCAGC AAGGAATTCC CCAACGGAGG GATTGCCTTA
GATCTGGCAG CAGGTACCGG CAGGCATACG CTGTTCTTGT CAACAGACAA CTGGCAGGTC
AGAGCAGTAG ATATTTCAGA TGTGGCCATG GAAAGACTGG CAGAGAAAGC GGCCGGTCGG
CCGGTGCAGA CAATCTGTAC AGACCTGGCG GAATATGCTT TTCCCCAGGC AGCTTTCGAC
CTGATCGTAC TGTATTATCA TTTTGACCGG GCACTGTTTG CTGCTGTCGG CAAAGCCCTG
AAACCCGGCG GATTACTCAT CAGTAAACAG GCGGTAGGAA AACCAGTTAA TCCACACACC
TTACAGGCAT ATGAACTATT ACAACTAACG GAAGGACTGG AACAAATCAG CTATGCGGAA
AGACCTGTAA AGGAAAGGGG AGTAGCAGAA TATTTGGGTC GTAAACCTTT TTAA
 
Protein sequence
MLWNERYTKG LPALEIPDPF FVKMYEEHIS KEFPNGGIAL DLAAGTGRHT LFLSTDNWQV 
RAVDISDVAM ERLAEKAAGR PVQTICTDLA EYAFPQAAFD LIVLYYHFDR ALFAAVGKAL
KPGGLLISKQ AVGKPVNPHT LQAYELLQLT EGLEQISYAE RPVKERGVAE YLGRKPF