| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4116 |
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| Symbol | |
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| ID | 8360289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5131188 |
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| End bp | 5132270 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644966288 |
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| Product | protein of unknown function UPF0118 |
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| Protein accession | YP_003123777 |
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| Protein GI | 256423124 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.614918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.119486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCTA ACGCTAACAA GCAGTCCCCG TTTCTTATTA AAGCGCCCCT GATCCTTATC
GGCCTTTATC TTTTCTTTTA TTTCCTCTTT CTGCTGAAAG AAATCCTGGT ACCTTTCGCA
TTCGCAGGAT TAATAGCCAT TCTCCTGAAT CCTCTCTGTA ACAGACTGGA GAGACTCCGG
ATTCCCAAAG TGTGGGCGAT TTCCCTCAGC CTGCTGCTTG CCGCACTTGT ATTGGCTGGC
TTGTTCTATT TTTTATCCGC ACAGATCAGT CAGTTTGGAG AACTGATTCC CACCCTGAAA
ACCCGCTCAC AGGAACTGAT GGGAGAACTA CAGCAATGGG TTGCACTGAA ACTAGGTATT
TCCATGGAAA AACAGACCGA TATGCTGCAT AAACTAACTG ATAACGGTCA ACAATACCTC
GGGCATACTT TAGGGTCTAT TTTCGGCGTA TTAGGGGTGT TTTTTCTGCT ACCGGTGTAC
ACATTTCTGC TCCTGTTGTA TAAAAACCAG TTGGTCAATT TTATATATGA AAGCTTCGGC
TCCGAACACA AAGAGCATGT ACAGGATGTA TTGCAATCAA CCAAAGGAGC AATTCAGAGT
TATATCGCAG GATTGCTGAT TGAAACAGCT ATCATAGCTG TACTGAATTC AATTGCGCTA
TTGATTTTAG GTGTAAAATA TGCCATACTG CTCGGCACAA TCGGCGCTAT TCTGAACCTG
ATTCCTTATA TCGGCGGATT GATCGCCATT GCTTTGCCTG TAATGATCGC CACCGTTACC
AATGATAACT TTACAACTCC TTTACTGATA GTAGGCGTTT ACCTGCTGAT ACAGTTCATC
GATAATCACC TGATCGTACC CAAAGTAGTT GCTTCGAAAG TCTCTATCAA TGCGCTTATT
TCTATCGTGG TAGTTCTTAT GGGAGGCGCC TTGTGGGGAG TTAGTGGTAT GTTCCTATCC
ATCCCTTTTG TGGCGATTCT GAAGATCATT TTTGACCATA TCGACGGACT AAAACCCTGG
GGTAAATTAT TGGGTGATAA TAACCCCGGC AACCTCATCA AATCAAATCA TAAAAAAGAG
TAA
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| Protein sequence | MQANANKQSP FLIKAPLILI GLYLFFYFLF LLKEILVPFA FAGLIAILLN PLCNRLERLR
IPKVWAISLS LLLAALVLAG LFYFLSAQIS QFGELIPTLK TRSQELMGEL QQWVALKLGI
SMEKQTDMLH KLTDNGQQYL GHTLGSIFGV LGVFFLLPVY TFLLLLYKNQ LVNFIYESFG
SEHKEHVQDV LQSTKGAIQS YIAGLLIETA IIAVLNSIAL LILGVKYAIL LGTIGAILNL
IPYIGGLIAI ALPVMIATVT NDNFTTPLLI VGVYLLIQFI DNHLIVPKVV ASKVSINALI
SIVVVLMGGA LWGVSGMFLS IPFVAILKII FDHIDGLKPW GKLLGDNNPG NLIKSNHKKE
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