| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4089 |
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| Symbol | |
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| ID | 8360262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5087542 |
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| End bp | 5088234 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644966261 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003123750 |
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| Protein GI | 256423097 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00519658 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAGA TTAAACTACT GCTGGTCGAA GATGAAATAG TGCTGGCTGG CGTAGTCAAA
GAAACCCTGG AAGCAAACGG ATTTCAGATC AGTCATGCCG AAAATGGTCA GCAGGGATGG
GAACAATACC TGTCCTTCCG CCCTGAACTT TGCGTTGTAG ATATCATGAT GCCCCGGAAA
GACGGATTAT CGCTGGTAAA GGACATCCGC AGTGTGGATG AACAAACGCC TATCATTTTC
CTCACGGCTA AAAGTGAAAC CCAGGACGTT ATTAAAGGCT TGCAAACGGG TGCGGATGAC
TATATAAAAA AACCTTTCAG TATTGAGGAA CTGATACTGC GTATTAAAAC CCTGCTGAAA
CGCACACAAC CACTGCTTAC GCCTTCCAAC GGCAGTAATG GTATCTATTG CATGGGCGCC
TATATCTTCG ATTATAACCG CCAGGAACTA CGGCATGAAA AAGAGCAGAT CCGCTTATCC
CTGCGGGAAG CAGATATACT GAAAATGCTG GCTGAAAAGC CCAATGTCAC CACACACCGT
AAAAACATCC TGCTGGATCT ATGGGGAGAT GACAATTTCT TCAATGCCCG TAACATGGAC
GTCTATATCA GCAAGATCCG GAAATACCTG CAACACGATT CTTCAGTTCA ACTGATCAAT
GTCAGGGGGC TGGGATATAA ACTCGTCTTT TAG
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| Protein sequence | MKKIKLLLVE DEIVLAGVVK ETLEANGFQI SHAENGQQGW EQYLSFRPEL CVVDIMMPRK
DGLSLVKDIR SVDEQTPIIF LTAKSETQDV IKGLQTGADD YIKKPFSIEE LILRIKTLLK
RTQPLLTPSN GSNGIYCMGA YIFDYNRQEL RHEKEQIRLS LREADILKML AEKPNVTTHR
KNILLDLWGD DNFFNARNMD VYISKIRKYL QHDSSVQLIN VRGLGYKLVF
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