| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3992 |
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| Symbol | |
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| ID | 8360165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4966532 |
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| End bp | 4967188 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966166 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003123655 |
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| Protein GI | 256423002 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.177922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.23268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAGG CATTTATTTT CGACATGAAC GGCACGATGA TCGATGATAT GGCATATCAT
TTAGAGGGCT GGTTTAATAT TCTGAATGAT GACCTGGGGG CAGGTATGAC CCGGGAGGCG
GTGAAGAGGG AGATGTATGG TAAGAATCAG GAGTTGCTGA TCCGTATTTT CGGGAAGAAC
CGTTTTACGG AGGCAGAGAT GGATGCATTA TCCATGGAAA AGGAGCGGAA GTACCAGCAG
GCGTATCTGC CGCACCTTCG TTTGATTCCG GGACTGGACA CTTTCCTGGA AGCAGCTGAG
AAAGAGGGTA TCCTGATGGG TATCGGTACG GCGGCTATTC CGTTTAACGT GGATTTTGCG
CTGGACAACC TACAGATCCG CCACTATTTT AAAAGTATCA TTACTGCGAA TGATGTTGCT
ACGAGTAAAC CGAATCCTGA GGTTTTCCTA AAGGCGGCGG AGGAACTGGG CGTTGATCCT
GCGAACTGTA TTGTATTTGA GGATGCGCCA AAAGGAGTAG AGGCAGCTGC AAATGCGGGT
ATGAAAGCGG TGGTACTGAC GACTATGCAT ACTGCTGAGG AGTTTATTGG CTTTGACAAC
ATACTCACGT TTGTGCCTGA TTACACGACA CTTAGCACCA GTGGTTTGTT CAGATAA
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| Protein sequence | MKKAFIFDMN GTMIDDMAYH LEGWFNILND DLGAGMTREA VKREMYGKNQ ELLIRIFGKN
RFTEAEMDAL SMEKERKYQQ AYLPHLRLIP GLDTFLEAAE KEGILMGIGT AAIPFNVDFA
LDNLQIRHYF KSIITANDVA TSKPNPEVFL KAAEELGVDP ANCIVFEDAP KGVEAAANAG
MKAVVLTTMH TAEEFIGFDN ILTFVPDYTT LSTSGLFR
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