| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3945 |
|---|
| Symbol | |
|---|
| ID | 8360118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 4903616 |
|---|
| End bp | 4903819 |
|---|
| Gene Length | 204 bp |
|---|
| Protein Length | 67 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644966119 |
|---|
| Product | cold-shock DNA-binding domain protein |
|---|
| Protein accession | YP_003123608 |
|---|
| Protein GI | 256422955 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0509422 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.707539 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAA AATTCCAGGG AACTGTAAAG TTCTTCAACG AGACAAAAGG ATTCGGCTTC
ATCATTCACG AGGAATCTGA TAAAGAAACT TTTGTTCACG TTAATGGTCT TATTCACGAG
ATCCAGGCTG ACGACAGAGT AGAGTTTGAA CTGCAGGAAG GCCGTAAAGG TATGAACGCC
GTTAACGTTA GACGTATCGA CTAA
|
|---|
| Protein sequence | MTTKFQGTVK FFNETKGFGF IIHEESDKET FVHVNGLIHE IQADDRVEFE LQEGRKGMNA
VNVRRID
|
|---|
| |