Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3919 |
Symbol | |
ID | 8360092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4868176 |
End bp | 4870263 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644966093 |
Product | chitinase II |
Protein accession | YP_003123582 |
Protein GI | 256422929 |
COG category | [R] General function prediction only |
COG ID | [COG3858] Predicted glycosyl hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00105192 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0100672 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACTCCC TTTTCAAAAA TATCACTGGG ATATTTTTGT TCCTTCTTAT CTTTTCATTT ACCGGGACGA AAATATACGC CAATGATGTA CATACCTACA GGTATGATAC CACGCAACCA AAGACAATCA ATCTGCCGGC CTTCCAGAAA GACACCACAG GAAAGGTAAA ACTGCTGCAG AAAATTGTTT CCGCGTTACA GTTCAGGCGA AATGCCCGGG CGCGTGAGCA ACAACGTGTG ATCACCATCA TCAGAACGGT GATGGCCGAT TCCATGGTCG CCACCTCCGC AGATATCAAA AAACTGAATG CTGAGTTATC ACTACAGCAG AACCAGCATT TTGATTCACT GCGTGCACTG ATAGATAAGA TCATGTCGCG GCCCGAACCA ACACCTGCTC CAGACGATCC GGCAGAAGAA GTAATCGATA CGCCCGTTGC GCCCGTTTCT GAAGCAGATG TCACAGCGCT CATTAACAAG ATCATTCCCA TCCTGCAACA GAAAGAAGCA GAAGAAAGGA ACAGCGCCGC CCAGCAGCAA AGATTACAGA AGGTCCGCGA ACTATACGGC CGCGACCCCG ATAAGATAGA TACGTTGCCC GTCAATGACT CTATCGGCAA GACGTATACC TTACAATTAG GACATAAAGC GGCGGTTATC GGCATCCATC CTTATTGGAT GAGCGATAAG TTTCTGCATT ACAATTATAC GACGATCAGT GAGGCAAACT ATTACGGTTA TACGACTGCT GTAAACGCAA CCCGCATACC GGATTCACTA CAGTTCTTCA ACCTGGCGAA TAACCGCACC TTCACTTTTT ATGAAACCGA TGCCTCCCGT ATAGAAGCAT TGCTAAAGGA TGAAAGTTCA CAATTACACT GTGTAGACTC CCTCCTGCTT TTATTAAGGC AATACCAGGC GGAAGGTGTG AATGTATGGC TGGCTGCATT GAATGGAAAA CAAAGAACGG CCTTTACCCA TTTTATCGGT CTGCTGCATA ACAACCTGAA CATTGCCAAT CCACAATACC GTTTAACGGT TACAGTGCCG CCGTTTGACG AAGCAGCGGC TTACGACCTG CGGGCATTGA ACAGCTTTAC CACACATTTC CTGGTCGACT TTACAAAGGC CGGCGGAACA GCTGCCGGAC CTCTGTCTCC CATGAAAGGA GATGCCCGGA GAGCGATTGA ACCAGTGATT TCCCGCCTGC TAAATCAACA GATTCCGCCT GCTAAATTCA TCCTGCTCTT ATCTTATTAT GGTACCGAAT GGAAGAAAGG CGCTGATGGC AGAGACCTGT TCACCCGCTA TGTTTCTTAC AGCGATATCA AAAAACGATT CCCTTCCGAT ACCTCGGTGA ATTATGACGA AGATGCGGTA GCAGCATTGA TCAGGGAGAA AGATGCACCG GGTACGGTGA CGTCGGAGAT CTGGTTTGAC GATGCCAGTA CGCTTGACGT GAAATATGAC TTTATCCTGA ATATGGGTCT TGGCGGCGTG GCAGTATGGC CACTGGGTGC AGATGATGGT TATGGAGAAT TATGGGATGT ACTGACAGAC AAGTTTGTAA GCATCGATAC CACTTTCCTG GCAACGGTCC CGCTGGTTCC TCAGACGGAA CCTACCTTGT CCTGGTGGGG CAGACTGGTA AAAAAGCTAC GCCATGAGGC ACATGTCCTG AAGCTGATGT TTACGGATCC CTGTCAGCTG GATATTGAAA ACAGGCACGG ACATAACGAC GATACCTTCT TTGTATGGCT TACAGTATTC CTGCTGATCA CTACACTGCT GATCGGGTTC CTGTATGCAT ATAATCTAAG AATGAAGGGA ACTAGCTGGA AATGGAGAAA AATGATGCTC CGTATACTGG TTGGGTCTGT ATTTGTAACG GCATTCTTTG CTATTGCGGC AGGATTTCTG AACAGGGACG TTCCATTTGG TATTACGCCG AACATGAGTG CCGGGGCCAG ATGCGTCACC ATCCCTATGC TGGATGCATT ACTGATCTTT GCCGCAGGTA TATGCCTTGG TATGCTGATT ATGAGACTAC TGATACGTCC TTTACTGACA CACGAGGATA AGCCTTAA
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Protein sequence | MYSLFKNITG IFLFLLIFSF TGTKIYANDV HTYRYDTTQP KTINLPAFQK DTTGKVKLLQ KIVSALQFRR NARAREQQRV ITIIRTVMAD SMVATSADIK KLNAELSLQQ NQHFDSLRAL IDKIMSRPEP TPAPDDPAEE VIDTPVAPVS EADVTALINK IIPILQQKEA EERNSAAQQQ RLQKVRELYG RDPDKIDTLP VNDSIGKTYT LQLGHKAAVI GIHPYWMSDK FLHYNYTTIS EANYYGYTTA VNATRIPDSL QFFNLANNRT FTFYETDASR IEALLKDESS QLHCVDSLLL LLRQYQAEGV NVWLAALNGK QRTAFTHFIG LLHNNLNIAN PQYRLTVTVP PFDEAAAYDL RALNSFTTHF LVDFTKAGGT AAGPLSPMKG DARRAIEPVI SRLLNQQIPP AKFILLLSYY GTEWKKGADG RDLFTRYVSY SDIKKRFPSD TSVNYDEDAV AALIREKDAP GTVTSEIWFD DASTLDVKYD FILNMGLGGV AVWPLGADDG YGELWDVLTD KFVSIDTTFL ATVPLVPQTE PTLSWWGRLV KKLRHEAHVL KLMFTDPCQL DIENRHGHND DTFFVWLTVF LLITTLLIGF LYAYNLRMKG TSWKWRKMML RILVGSVFVT AFFAIAAGFL NRDVPFGITP NMSAGARCVT IPMLDALLIF AAGICLGMLI MRLLIRPLLT HEDKP
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