Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3820 |
Symbol | |
ID | 8359992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4803460 |
End bp | 4806159 |
Gene Length | 2700 bp |
Protein Length | 899 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644965993 |
Product | NADH-quinone oxidoreductase, chain G |
Protein accession | YP_003123483 |
Protein GI | 256422830 |
COG category | [C] Energy production and conversion |
COG ID | [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR01973] NADH-quinone oxidoreductase, chain G |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.102025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACGCA TATACATAGA TAACGTTCCT TTCGAAGTAA AAGCAGGCAA AAACCTGCTG GAGGCCTGCC TGAGCCTGGG CATCGACCTT CCCTACTTCT GCTGGCATCC CGCCATGGGC AGTATCGGCG CCTGCCGGCA ATGTGCTGTC AAAGTGTACA AAGACGCTGA CGATACCAAA GGGCGTATCA TGATGAGTTG TATGGAAAGT GTAAAAGACG ACCTGCATAT CTCCGTCTGT GACCCCGGCG CAAAGGCATT CCGTGCACAG GTTATAGAAT GGCTGATGAC CAATCACCCG CATGATTGTC CGGTATGTGA TGAAGGCGGT AGTTGTCACC TGCAGGACGT CACCGTCATG ACCGGCCATG ACTACCGGCG CTATGAATTC AAAAAACGCA CCTATACCAA TCAATACCTT GGTCCGCTGA TCAATCATGA GATGAACCGC TGCATACAAT GCTACCGTTG TGTGCGATTC TACCGGGATT ATGCCGGCGG TAAGGATCTC AACGTATTCT CCGCACATAA CCACGTGTAT TTCGGCAGGG AAAAGGATGG CGTACTACAA AGTCCCTTCA GCGGTAACCT TGCAGAAGTA TGCCCTACCG GCGTATTTAC AGATAAAACA CTCAAGGAAC ATTATACCCG TAAATGGGAC CTGACCAACG CACCGGCCAT CTGTCAGCAT TGTAGTCTGG GATGTAATGT CATTGCAGGA GAGCGTTACG GTCAGCTACG CAGTATCGTG AACCGTTACA ACAGCGAGGT CAATGGTTAT TTCCTCTGCG ATAAAGGCCG CTTTGGTTAT GAATTCGTCA ACAGTGAAAA CCGCATTACA CAGACGTTGA TCCGTCATCG CACAGCAGAG GCGGTAGATG AAAATACGTT AATGAACTAT CTGCCCAATA TCCTTATCGG TCATACGGTG ATTGGTATTG GTTCTCCCAG GGCTTCTATC GAGAGTAATT ACGCATTGAT GGAGCTGGCC GGCAAGGAAT GCTTTTACCA GGGATTGCCT GACAACCAGG TATTCCTCCA ACAGAAGATC GTTGACATCC TTTCCGCAGG TACGGTTCAT ACCCCTTCAC TAAAAGAGAT CGAACAGGCG GACGCCGTAT TGGTACTAGG AGAAGATATC TGGAATACGG CGCCTGTCAT GGCACTGGCT GTACGCCAGT CTGTTATGAA AACAGCCGCT GCGCATGTAC AGGAACAGGT ACCACTCCCC GGCTGGCATG ATGCAGCATT AAAAGAACTG GCACAGGAAA GCAAAGGTTT TTTGGCGAAT ATGTGCGTAC TGCCTTCTCC TTTGGATGAA ATAGCAGCCT GCCAGGTACA TGGCGCCCCT GACGATATGG CCCGCCTGGG CTTCCAGATC GCGCACCTGT TGAATAACAC GCTGCCGGCA GTCGACAAAG CATCTGCCCC CCTCCTGCAC AATGCCACAA TGATCAGTCA GCAATTGCTG CTGGCTAAAC ACCCTGTGAT TATTGCAGGT ACATCTGCCG GCAGTGAAGC ACTGATCAGG GCCGCTTATG ATATCGCGGC TTCCCTTCAG AACAATGAAC AACGTACAGG ACTTGCTTTT GTATTGCCTG AATGTAATAG TATGGGACTT GCCATGACGG GTGCTTCATC CTTTGAAAAA GCGCTGGCGA TCGTAGAAAA GAACCCGGAC GTTACCGCTG TCATTCTTGA AAATGACCTC TACAGGAATA TTCCGGCCGA CATGGCAGAT ACCTTTTTCA GTAAATGCCG GCAGTTGGTC GTATTGGATA CGCTCCATAA CCGCACCACC GAAAAGGCGG ATGTATTGAT ACCCATAGCC ACCTTCGCGG AAGGCGACGG CACTTTTATC AATAACGAGG GACGCGCACA AAGGAGCTAC CAGGTATTCA TGTCGCCCGA TAAAGCCCTG AAAGAAGCCT TTAAATGGCT TTTTGAGATG AAGGTGATAC GCAGGGCTAT TTCAAATGGT CATGACGTAC ATCCGGACGA AATGCTGGCA GGATTGGAAA GGGCCTATCC GCTATTCAAA GGCATTGCCG ATGTAGTGCC TTCACATGCG TTCCGCATAC ACGGATCGCG TATTCCCCGG GAATCACAAC GATATAGCGG ACGTACGGCC ATGCAGGCCA ATAAGGCCGT CAGCGAACCT AAACCGCTAC AGGATGACGA TTCCCCCCTG TCATTTACCA TGGAAGGCTA CCGGGGAATG CCGCCTGCTC CTCTGATCCC TTATTTCTGG GCGCCGGGAT GGAATTCAGG GCAGGCAGTC AACAAATATC AACAGGAAAC CGGCGGTGCT CTAAAAGGCG GAGATCCGGG CATCCGCTTA TTCAGAGCAA CAGGTGCTAC ACCTGCCTGG TTCCAGGATA TACCGGACGC TTTTACTGCC CGGCAGGGAA AATGGTTCCT GTTACCGCAA TACCAGCTGT TTGGTTCCGG CGAACTCAGT ATCTACACTA AAGGCATCGC GGCACTCTCC CCTGCGCCCA AGGCACTCCT TTCTGCAAAG GACGCTGCTT TGCTGAATAT GACAACAGGA GACCTGCTTT CTGTACAGAC AGACAACAGA ACCTACCAGT TTCCCCTGGA AACAAGCGAT CATATGCAGG ATGGCATCGT CATCCTCACA GCAGGATTAA AAGGCATGGA GTCTTTGAGC TGGGGCACAT GGGTAAATCT TTTTAAATAA
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Protein sequence | MPRIYIDNVP FEVKAGKNLL EACLSLGIDL PYFCWHPAMG SIGACRQCAV KVYKDADDTK GRIMMSCMES VKDDLHISVC DPGAKAFRAQ VIEWLMTNHP HDCPVCDEGG SCHLQDVTVM TGHDYRRYEF KKRTYTNQYL GPLINHEMNR CIQCYRCVRF YRDYAGGKDL NVFSAHNHVY FGREKDGVLQ SPFSGNLAEV CPTGVFTDKT LKEHYTRKWD LTNAPAICQH CSLGCNVIAG ERYGQLRSIV NRYNSEVNGY FLCDKGRFGY EFVNSENRIT QTLIRHRTAE AVDENTLMNY LPNILIGHTV IGIGSPRASI ESNYALMELA GKECFYQGLP DNQVFLQQKI VDILSAGTVH TPSLKEIEQA DAVLVLGEDI WNTAPVMALA VRQSVMKTAA AHVQEQVPLP GWHDAALKEL AQESKGFLAN MCVLPSPLDE IAACQVHGAP DDMARLGFQI AHLLNNTLPA VDKASAPLLH NATMISQQLL LAKHPVIIAG TSAGSEALIR AAYDIAASLQ NNEQRTGLAF VLPECNSMGL AMTGASSFEK ALAIVEKNPD VTAVILENDL YRNIPADMAD TFFSKCRQLV VLDTLHNRTT EKADVLIPIA TFAEGDGTFI NNEGRAQRSY QVFMSPDKAL KEAFKWLFEM KVIRRAISNG HDVHPDEMLA GLERAYPLFK GIADVVPSHA FRIHGSRIPR ESQRYSGRTA MQANKAVSEP KPLQDDDSPL SFTMEGYRGM PPAPLIPYFW APGWNSGQAV NKYQQETGGA LKGGDPGIRL FRATGATPAW FQDIPDAFTA RQGKWFLLPQ YQLFGSGELS IYTKGIAALS PAPKALLSAK DAALLNMTTG DLLSVQTDNR TYQFPLETSD HMQDGIVILT AGLKGMESLS WGTWVNLFK
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