| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3694 |
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| Symbol | |
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| ID | 8359862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4632656 |
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| End bp | 4634356 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644965863 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003123357 |
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| Protein GI | 256422704 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.257564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.232243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGA ATACGAAAAG CGCACAGCTG CGTACGTATG ATGCCATTGT CATAGGATCC
GGCATCAGCG GCGGCTGGGC GGCTAAAGAA CTATGCCAGC AGGGGTTAAA AACCCTCGTA
CTTGAAAGAG GTCGCAACGT AGAACATGTA AAGGACTACC CGACTACCTT GAAAATGCCC
TGGGAATTTA CCCACGGCGG CATGAATACA GAAAAAGACC GCGAAGAGGA TCCGATCCAG
AGCGCGGAGT ATGACGAAGG AAACAGGCAT TTTTTTGTAC GCGATAAGGA CCATCCTTAT
GTACAGGAAA AGCCCTTCCA CTGGATCAGA GGCTATCAGG TAGGTGGACG TTCCCTTACC
TGGGGACGTC AGAGTTACCG GCTGAGCGAC CTTGATTTTG AGGCCAACAG CAAAGACGGT
CACGGCATCG ACTGGCCGAT CCGTTATAAG GATCTGGCGC CCTGGTACAG TTATGTGGAG
CAGTTTGCCG GCATCAGCGG ACAAGCCGAA GGGCTTTCGC AGTTGCCGGA CGGAGACTTC
CTCCCTCCCA TGGAAATGAA TATCCTGGAG AAACATTTCC GGGAACAGGT AAAGCAACGT
TTTGACGGAC GTTGTGTGAC TATCGGACGC GTCGCCAATC TTACAAGAGG CTGGAATGGA
CGTACCCCTT GTCAGTACCG TAACCTGTGC AGCCGGGGAT GTCCTTACGG CGGATATTTC
AGCAGTAATG CGTCTACCCT GCCGGCAGCT GCTGCTACAG GCAACATGAC GCTGCGCCCC
TTTTCCATCG TGGCAGAAAT ACTGTACGAT AAAGAAAAAG GACGCGCCAA CGGTGTGAGA
GTGATCGATT CAGAAACAAA AGAAGTGATT GATTTTTATG CGAAGATCAT CTTCCTGAAC
GCCTCTACCA TCGGATCGGC ATCTATACTG CTGCAATCTA CCTCCGCTGA GTTCCCCCAG
GGATTAGGCA ATAACAATGA TCTGGTAGGC AGACACCTCA TGGATCATCA CTTCAAGGTA
GGCGCTATGG GCGATTATCA TGGAATGGAA GACCGCTATT ATGAAGGAAG AAGACCTACC
GGTATTTATA TACCCCGCTT CCGTAATCTG GACGCAACAT CGTCTAAAAG CGATTACGTA
CGCGGTTTTG GTTACCAGGG ATATGGAGAA CGTGAAGGCT GGATGTATAC AGGTCTTACA
GAAGATGGAT TCGGAAAGTC CTTCAAAGAG AAATTCACCC GTCCGGGTAA ATGGGCATTC
TGGCTGGGCG CATGGGGAGA AACACTTCCT TATGCGGACA ACAGGGTGAC ACTGGATCCG
GCACTGAAAG ATAAATGGGG ATTACCACAG GCGAAGATCG CATTCAGTAT CCGCGACAAT
GAAAAAGCCA TGCGGAAGGA TATGCAGACC AGTGCCATGG AAATGCTGGA GGCAAGTGGA
TTCTCCAATG TGTCAGGGTT TGACTATAAC TATGTCGGAG GGGAATGCGT ACACGAGATG
GGGACAGCAC GCATGGGGCA TGATCCGAAG ACATCTGTAC TCAACGGAAA CAACCAGCTG
CATGACGTAA AGAATGTCTT TATCACAGAT GGTAGCTGTA TGACTTCTTC CGCTTGTCAG
AACCCTTCGC TGACCTACAT GGCATTGACA GCAAGAGCCT GTGATTTTGC CGTGAAAGCA
TTAAAAGCAG GAGATATTTA A
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| Protein sequence | MNLNTKSAQL RTYDAIVIGS GISGGWAAKE LCQQGLKTLV LERGRNVEHV KDYPTTLKMP
WEFTHGGMNT EKDREEDPIQ SAEYDEGNRH FFVRDKDHPY VQEKPFHWIR GYQVGGRSLT
WGRQSYRLSD LDFEANSKDG HGIDWPIRYK DLAPWYSYVE QFAGISGQAE GLSQLPDGDF
LPPMEMNILE KHFREQVKQR FDGRCVTIGR VANLTRGWNG RTPCQYRNLC SRGCPYGGYF
SSNASTLPAA AATGNMTLRP FSIVAEILYD KEKGRANGVR VIDSETKEVI DFYAKIIFLN
ASTIGSASIL LQSTSAEFPQ GLGNNNDLVG RHLMDHHFKV GAMGDYHGME DRYYEGRRPT
GIYIPRFRNL DATSSKSDYV RGFGYQGYGE REGWMYTGLT EDGFGKSFKE KFTRPGKWAF
WLGAWGETLP YADNRVTLDP ALKDKWGLPQ AKIAFSIRDN EKAMRKDMQT SAMEMLEASG
FSNVSGFDYN YVGGECVHEM GTARMGHDPK TSVLNGNNQL HDVKNVFITD GSCMTSSACQ
NPSLTYMALT ARACDFAVKA LKAGDI
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