| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3674 |
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| Symbol | |
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| ID | 8359841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4610578 |
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| End bp | 4612227 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965843 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003123337 |
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| Protein GI | 256422684 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0328426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.284517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAT CGCTTTTTCG TAAGAAATCT ATTATCAGTA TACTCAAAGA TGCTCAAGAT
GGTTTAACGG ATGCGCATGG AGGGGGAGAA CTCAACAAGG TATTAAAGGT AAAGGACCTG
ACTGCACTGG GCATTGCCGC TGTTATCGGT GCAGGTATCT TCTCTACGAT CGGTGAGGCG
TCTTTTCATG GTGGTCCTGG TGTTTCCTTA TTATTTATTA TTACAGCCGT TACCTGCGGA
TTTTCGGCGC TCTGCTATGC AGAATTTGCA TCCCGTGTAC CGGTATCGGG CAGTGCATAT
ACTTATTCTT ATGTCACATT CGGAGAGATA GCCGCCTGGA TCATAGGTTG GGCATTGATC
CTTGAATATG CCATCGGGAA TATTGCTGTG GCGATTTCCT GGAGTGGTTA CTTTAACAAT
CTGCTGGCTG GGATTGGAAA AGGATTAGGT ATAAATCTGT CGTTTCCGGA ATGGCTGACC
AGCAATTACG ATAGTGCGTC GCCTGAACTG TATGCTGCTG CGCCGCATAT ATTTGGGTTG
CCGGTGATCC TGAACCTGCC TGCATTTATT ATTGTGGTGC TGGTGACTTA CCTGGCTTTT
GTAGGTATCA GGGAGAGCAA GCGCAGCGCC AATTTTATGG TGGGATTGAA GATACTGGTG
ATACTCTTTG TGATTGTTGT AGGTGCTTTC TTTGTAAATA CAGACAACTG GACACCGTTT
ATGCCGAATG GCTTTTCGGG GGTACTGAAG GGCGTATCTG CGGTGTTCTT TGCTTACATT
GGTTTTGATG CGATCAGTAC GACTGCCGAG GAATGTGCGA ATCCGCAACG CGATCTGCCG
AAAGGGATGA TCTACTCGCT GGTAATCTGT ACCGTGTTGT ATATTCTGAT TGCCTTTGTA
CTGACGGGTA TGGTGTCTTA CTCACAGCTG AAAGTGGATG ATCCGCTGGC ATTTGTGTTT
AACGCGGTAA ACCTGCCTAA GGTGAGTTTC CTGATTTCCG TGAGTGCTGT AATTGCGACG
ACCAGCGTAT TGCTGGTATT CCAGATCGGG CAGCCACGTA TCTGGATGAG TATGAGTCGT
GATGGTCTGT TACCAAAGCG TTTCAGTATT ATTCATCCTA AGTTCAAAAC GCCTTCCTTT
GCAACGATTG TGACGGGTTT CCTGGTGGGG GTTCCTGCAT TGTTTCTGAA TCTGACGGTG
GTGACTGACC TGACCAGTAT CGGTACATTA TTCGCCTTTA TCCTTGTATG TGGTGGCGTG
CTGTTGTTAC CTAAACAGGA GAAGGATCCG CATTCAAAAC GTTTCAGTCT GCCATATATC
AATGGTCAGT TTATCGTACC GGCGATCATT ATCATTTTTG CCTACATCTT CCGCAACGAA
CTGCCGCAGC GTTTCTCTTT TGCCGGTGGC TGGGATGTAT GGAAACATAA TATTCCTTTC
TTCTTTTTTG CGGTGGCCGC GTTAGTATTT ACGTTTCTTT CTTTCCGCCA CAAATTGTCA
CTGATTCCTG TTTTAGGACT GCTGAGCTGT TTTTATCTGA TGACTGAGAT TGGTTTCAGG
AACTGGGTAG TGTTTTCCAT CTGGCTGCTG ATCGGTCTGG TGATCTATTT TGGCTACAGC
TACAGCAGGA GTAAGCTGGC ACAAGCATAA
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| Protein sequence | MSKSLFRKKS IISILKDAQD GLTDAHGGGE LNKVLKVKDL TALGIAAVIG AGIFSTIGEA
SFHGGPGVSL LFIITAVTCG FSALCYAEFA SRVPVSGSAY TYSYVTFGEI AAWIIGWALI
LEYAIGNIAV AISWSGYFNN LLAGIGKGLG INLSFPEWLT SNYDSASPEL YAAAPHIFGL
PVILNLPAFI IVVLVTYLAF VGIRESKRSA NFMVGLKILV ILFVIVVGAF FVNTDNWTPF
MPNGFSGVLK GVSAVFFAYI GFDAISTTAE ECANPQRDLP KGMIYSLVIC TVLYILIAFV
LTGMVSYSQL KVDDPLAFVF NAVNLPKVSF LISVSAVIAT TSVLLVFQIG QPRIWMSMSR
DGLLPKRFSI IHPKFKTPSF ATIVTGFLVG VPALFLNLTV VTDLTSIGTL FAFILVCGGV
LLLPKQEKDP HSKRFSLPYI NGQFIVPAII IIFAYIFRNE LPQRFSFAGG WDVWKHNIPF
FFFAVAALVF TFLSFRHKLS LIPVLGLLSC FYLMTEIGFR NWVVFSIWLL IGLVIYFGYS
YSRSKLAQA
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