Gene Cpin_3626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3626 
Symbol 
ID8359793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4551708 
End bp4552925 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content46% 
IMG OID644965795 
Productacyltransferase 3 
Protein accessionYP_003123289 
Protein GI256422636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.635249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00443185 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAACAA TCGCTTCCTC CAGACAGGCA TATCTTGATT GGCTACGTAT CCTGGCCATC 
TTTGGCGTAC TTATTTTCCA TTCCTCCATG CCCTTCGGCG CAGAACTGGA ATGGCATATC
CGTAATAAAG AAACCAGCAA TCTCTTCCTG GAACTCGTGT TCTTTATGCA CCTTTTCCGT
ATGCCCCTGT TGTTTTTTAT TTCCGGTACG GTCAGCTATT TCATGTTGCA GAACAGATCG
GGTGGGGGCT TTGTAGCATT GCGTACCAGG AGACTGCTGA TCCCTGTCTT ACTGGCCATA
TTGGTGGTCG TACCGCCGCA GGTCTACCTG GAAAGGGTGA CACAAGGTTA TACCGGCAAC
TTCTGGCAGT TTTACAGGGA AATGTTCACA TCCGGCGCCT ATCCCAAAGG AAACCTCAGC
TGGCATCATC TGTGGTTCGT CGCTTACCTG CTGATATATG ATATTATCTG CGCACCATTG
TTCGTCTGGA TCATCTCCCC CAGGGCACAT CACTTTCGCG ACAGACTGTT ATGGCTGGCC
AAAGGCAAAC GTGTCTATCT GCTCGCCTTA CCGGGGATGA TCATATATGC CTCCCTGACC
CTGCAATTCC CGGAAACAAA CGACCTGGTG CATGACTGGT GTTATTTCTT CTACTGGCTC
TGCTTTCTGA TTCCAGGGTT TATCTGCATT ACACAACCCG CTTTGATGGA TAGTCTGGAG
AGAAACAGGC ATTTCGCACT CCTGATGGCG TTTCTTTCCA TTGTTACAAT CAATTATTTC
CGTTGGAATG ATCTGCAGCC ATGGGATGTG CTCAACAGCT GGAAACAGGA TCCACGTACT
TATGCGTTCC TGGCGCTGAG GGCTTTCTGC GGATGGGCAT GGGTATTCGC ACTGGTCGGT
TATGGTAAAA AATACCTGAA CAAACAGCAT TCATCACTGA ACTATATTAA CCAGGCTGTC
TATCCTTTTT ATATATTGCA TCAGACAATC ATCGTCATAC TGGCATTTTA TGTAGTAAAA
ACAACAGATA CCATCGGCGC GAAGTATATA TTCATCGTAA TTACGACCTT TATATCGTCA
ATGAGCATTT ATCATCTGTT GATCCGCCCG TATAATATTA CCCGCTTTCT GTTTGGTATG
AAGCCTGTAA AGAAGAACAC ACAGCAAAAA TATGAGTTAG TGATACAAAA TGAACAGGCA
TTATTGTCAG CTTCCTGA
 
Protein sequence
MQTIASSRQA YLDWLRILAI FGVLIFHSSM PFGAELEWHI RNKETSNLFL ELVFFMHLFR 
MPLLFFISGT VSYFMLQNRS GGGFVALRTR RLLIPVLLAI LVVVPPQVYL ERVTQGYTGN
FWQFYREMFT SGAYPKGNLS WHHLWFVAYL LIYDIICAPL FVWIISPRAH HFRDRLLWLA
KGKRVYLLAL PGMIIYASLT LQFPETNDLV HDWCYFFYWL CFLIPGFICI TQPALMDSLE
RNRHFALLMA FLSIVTINYF RWNDLQPWDV LNSWKQDPRT YAFLALRAFC GWAWVFALVG
YGKKYLNKQH SSLNYINQAV YPFYILHQTI IVILAFYVVK TTDTIGAKYI FIVITTFISS
MSIYHLLIRP YNITRFLFGM KPVKKNTQQK YELVIQNEQA LLSAS