Gene Cpin_3602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3602 
Symbol 
ID8359769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4494249 
End bp4495598 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content48% 
IMG OID644965772 
Producthypothetical protein 
Protein accessionYP_003123266 
Protein GI256422613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000620867 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000696786 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAAAAC GCGTATTTAT TGCAGCTATC GCTGCTTCGG CTATTTTTAC TTCCTGCAAA 
AAGGAAGGAG CAATTGACCA GAAAGAAGGT CAGTTTGATC GTTCAGTAAA CGCAGGTGTT
GGTGCTGATA CCCGCTCCTG GCCATCCCTC ACAGGAACTA TTCCTGCTAC CATTGCCAGC
GGTACATTTA CGTTGACCAA TGACAGAGTA TGGATCCTCG ACGGTCCAAC CTATGTACAG
AATGGCGCCA CATTGCTGAT ACAGCCAAAC ACCCTCATAA AGGGAAAATC TAATTCTACA
CGCGGTACTT CCTACCTGAT CATTACCAAA GGTGGTAAAC TGATCGCGGA CGGTAACGCA
AACACATCTA TCGTTTTCAC TTCTGACAAA CCAAAGACTC AGCGTGCTCC TGGCGACTGG
GGTGGCATCG TTATCCTGGG TGATGCTCCA ACCAACGCTA ATGGTTCACA GATCGAAGGT
ATCCTGCCTG CTGAAATTCC TGCAGGTTAT TCTATCACCT ACGGTGGTAC CAATGCTTCT
CACAATGGTG GTACACTGAA ATGTGTACGT ATCGAGTATG CTGGTCGTGA TCTGGGTAAC
GGTAACGAAA TCAACGGTCT GACTTTAGGC GGTGTCGGTA GCGGTACGGT ACTGGATAGC
ATCCAGGTGT CTTTTGGCGC TGATGATGCT TTCGAATTTT TCGGTGGAAC CGTTAATGCG
AAACACCTGG TGGCATTTGC TAATAACGAT GACGAGTTCG ATTTTGACCT GGGTTACGTG
GGTAATATCC AGTATGCAGT ATCTCTGAGA TACCCTGGTG TTCCTGTAAC TGCAGATCCA
AACGGTATCG AGTCTGACAA CAACGCTGGT GGTACCAGTG CAACTCCTAT CACCCGTCCT
ACGCTGGCTA ACTTCACCAT CCTTGGTTCT GAAGTAAGAA GAGACAGTCT GTTGTACGGT
GCTCGTTGGA GAAGAAACTC TTCTTTCAAC CTGACTAATT CAATCATTGC AGGTTATGAC
GAAGCAGGTG TGATCTTTGA TGGCGCTGGC GCTGTTACTC ACATCTCTAC TGCTGGTGAT
GGTGTATTCA CCAACAGCCG CGTACATGGC TTCACACTTG GCGTTACACC AACTCCGGTA
GCTGCCTGGG TAGGTTGGAG CGGTAACGTT ACAAGCAACA TCGCAAACGC ATTCAGCTTT
GCTGGTCTGC AGGCTCCTTT CAACTATCCT GCTCCTGATT TCCGTTACAC ATTAGCTGCT
AACGCAGGTA AAGGTGCATT CGGTGCAGCA GGCAGCGTGC GTTGGGATGA TAACTGGGCT
TCTTACGATC CAGCTAACGG TAACTATTAA
 
Protein sequence
MLKRVFIAAI AASAIFTSCK KEGAIDQKEG QFDRSVNAGV GADTRSWPSL TGTIPATIAS 
GTFTLTNDRV WILDGPTYVQ NGATLLIQPN TLIKGKSNST RGTSYLIITK GGKLIADGNA
NTSIVFTSDK PKTQRAPGDW GGIVILGDAP TNANGSQIEG ILPAEIPAGY SITYGGTNAS
HNGGTLKCVR IEYAGRDLGN GNEINGLTLG GVGSGTVLDS IQVSFGADDA FEFFGGTVNA
KHLVAFANND DEFDFDLGYV GNIQYAVSLR YPGVPVTADP NGIESDNNAG GTSATPITRP
TLANFTILGS EVRRDSLLYG ARWRRNSSFN LTNSIIAGYD EAGVIFDGAG AVTHISTAGD
GVFTNSRVHG FTLGVTPTPV AAWVGWSGNV TSNIANAFSF AGLQAPFNYP APDFRYTLAA
NAGKGAFGAA GSVRWDDNWA SYDPANGNY