| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3546 |
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| Symbol | |
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| ID | 8359713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4419473 |
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| End bp | 4419916 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965717 |
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| Product | alkylhydroperoxidase like protein, AhpD family |
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| Protein accession | YP_003123211 |
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| Protein GI | 256422558 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.225278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0570392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGACAA GAACATTCAT CGGTAAAAAC CATCCTGAAT TATACAAAGT GATGGCAGAC
CTGGACAAGG CGGTACATGC GGCAGGTATT GATAAATGGC ATCATGAACT GATCAAGATC
GCGGCATCAC ACTTCAATGG CTGCGCTTAT TGTGTCGACA AACATACGCA GGACGCTATG
GCCCTCGACA TCCCGGTCAG GAAGATCGTA CTGATCCCCG TATGGCACGA AGCCACCGAT
CATTTTACGG TAGAAGAGCA ACTGATCCTG CAACTCACAA AAGCAGTGAC CTTTATACAT
GAACACGGTA TTGCGGATGC ACTGTATGAT GAATGCCTGC GGGTATTCGG AGAAGATTAT
ACGGCCAAAC TGATCATGGC GGCTACCCTG ATCAATACCT GGAACCGTAT AGGCGTATCT
TTCAAGCTGC AACCCAAATT CTGA
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| Protein sequence | MATRTFIGKN HPELYKVMAD LDKAVHAAGI DKWHHELIKI AASHFNGCAY CVDKHTQDAM
ALDIPVRKIV LIPVWHEATD HFTVEEQLIL QLTKAVTFIH EHGIADALYD ECLRVFGEDY
TAKLIMAATL INTWNRIGVS FKLQPKF
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