Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3501 |
Symbol | |
ID | 8359667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4365422 |
End bp | 4367170 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644965671 |
Product | ATP-dependent endonuclease of the OLD family-like protein |
Protein accession | YP_003123166 |
Protein GI | 256422513 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATATTAG AAGAAATAAG CATTCAAAAT TTTCGGTCGA TAAAAGATGA GACAATAACC TTTCCCCACA ATTGCCTAAT CTTGTTAGGT AAAAATGAAG CGGGGAAAAC TAATGTGCTA AAGGCAATTG CAGCCCTTTT TAATTTATAT AAAGTATCAG GAAAGGACAA AAGAAAACGA CTGGGGAACG AAGTATTAAC AGATTTTTTT GTAAGGGCTG TTTTTAAACT TACTGAAGAG GACTTTACTA AGGTTGAGGA GTCTTTTTTC CAAACATATA GTGGCATTGA AAATATAGTT TTTGTGAAAG AGATCTCTAT TCGCGACTAT ATCAAAGCTA TGTTTTATAA TCTCCTTATA AATGTCAATA TTCGCGATAA TGCAAGCCCT CAGTTTTCAT ATTGGACTAA TAGTTCCGAA TATGTGAAAT TAAAGCACCC ACTTTTTATA AATGGGAACA ATATTTCGTT TGATATTGGG AGTGAGTTTA ATTTATCAAG ATCAATATTT GAAATCGTAA AGGGACTCTA TAATGAAAAT CCAATTAACT GTCATTATTG GCAATATAAT GATAGTTATC TTCTTCCCAG TGCTGTAAAT ATTGATAATT TTATCTCTAA TCCTTCGACT TGTAAGGCAC TAGAGAATAT TTTTGCTTTG TGTGGCCGTG AGAATATAAA AAAAGAGTTT GAAACGGCTA TGTCCGAAGA TGGCGACTAT CTCAATCTTT TAGAACAATT ATCCCAAAAA GTGTCTACTA CGTTTCAAAA GATATGGAAG GATTTTAAAA ATACATCGAT TCAAATCTTA CCGAACGGAG ATGAAATGCT TATTAAGGTA GTAGAAAAGG CCAAATATAA TTTCGAAGAT CGTAGTGACG GATTTAAGAA GTTCATTAGC ATATTGTTAA TGTTGTCTAC TCAGTCCAGA GCAAACAAAA TGTTAGACAA TGACATTATT TTAATTGATG AGCCTGATCA AAGTCTTTAT CCGACAAGTG CTCAATATTT GAAGAATGAG CTTATCGAAA TTAGTAAGAA GTCTAAAATT ATTTATTCAA CGCATTCTCA ATATATGATT GACTCCGAAG TGATTGGTCG CCATATTATT GTTGAAAAAA ATGATGATAT AACTTCGCTA AAAAAAAATA TTTCTAATGC TCCTTTTGCC AGCGATGAAT TACTTAGAAG GGCTGTAGGC GTAAGCATTT TTGAATGCCT GAAAGCAAAG AATATTGTAT TTGAAGGATA TCTTGATAAG GCACTTTTTT CTTTTTATTG CAAGAGTTTT AACTTGGAAA AGGTTTTTAG CACTTACGGG CAAGTTTATT TGAATGGAAT CGCGGGGGCG GAGACCTTGG TGCAAATATT GAATTTGGCA GATAAGAAAT TTGTTATTGT GGCAGATTCA GATGAAACAT CAAATAATAA AAGAGCAGAT TTTACTAAGA ATTATCCAGA TTTCCAGAAT CGGTGGCTAG CTTATGCGGA TATATGTAAA AAAGTTTCTA CCATGGAAGA TTTTCTGACT TCATCACATA TAGAAAACCA ATTTAAGAAA CATGGATACA TTTACACTTA TGATTCTAGT AAGAATGCTA ATTATAATAT AGAGAAGGCC GTAAATAAGG ACAAAGAGTT AAAACAAAAA TTTAAGAAAA TATTAATTGA TACCGCCAAG AAAAGCGATA TTGAAACCGA ATATAAACTC TATTTGGATG CATTGAAGGA AGCACTAGAA GTGATTTAA
|
Protein sequence | MILEEISIQN FRSIKDETIT FPHNCLILLG KNEAGKTNVL KAIAALFNLY KVSGKDKRKR LGNEVLTDFF VRAVFKLTEE DFTKVEESFF QTYSGIENIV FVKEISIRDY IKAMFYNLLI NVNIRDNASP QFSYWTNSSE YVKLKHPLFI NGNNISFDIG SEFNLSRSIF EIVKGLYNEN PINCHYWQYN DSYLLPSAVN IDNFISNPST CKALENIFAL CGRENIKKEF ETAMSEDGDY LNLLEQLSQK VSTTFQKIWK DFKNTSIQIL PNGDEMLIKV VEKAKYNFED RSDGFKKFIS ILLMLSTQSR ANKMLDNDII LIDEPDQSLY PTSAQYLKNE LIEISKKSKI IYSTHSQYMI DSEVIGRHII VEKNDDITSL KKNISNAPFA SDELLRRAVG VSIFECLKAK NIVFEGYLDK ALFSFYCKSF NLEKVFSTYG QVYLNGIAGA ETLVQILNLA DKKFVIVADS DETSNNKRAD FTKNYPDFQN RWLAYADICK KVSTMEDFLT SSHIENQFKK HGYIYTYDSS KNANYNIEKA VNKDKELKQK FKKILIDTAK KSDIETEYKL YLDALKEALE VI
|
| |