| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3474 |
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| Symbol | |
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| ID | 8359640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4337953 |
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| End bp | 4339686 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965647 |
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| Product | phospholipase D/Transphosphatidylase |
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| Protein accession | YP_003123142 |
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| Protein GI | 256422489 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.365967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGTT ATAAAGGAAT TATCCGGATC AAGGATAATA AAGCCTTATT AGATGCAGGT
GGTATTATGG TGGAGCTGGA CGCCGATCCG GCCACTTTCG CGCCATATAA TGGCTGTATG
GTAACAATAA ACGGCAACCA ACAGGGCGAT GTCGTACAGC AAGCAACGCT TGCCACTACT
GCTGAATTAG CCCCTGCTGG TGAAAATGGC CATACAAGCC TGCCTGCTGT TATTACCGCC
ATAAAAACAC ATCCCGAACT CGCTGCCATA CCCGGCTTAG TGGGATTGAG ACCCGGTTTC
AGCGAAAACC CGGATGCACC GGACCTGCCT GTTATTGTCG CCGTCTATCA TCCCGGACAA
AAGCCTGAGA CCATGCCTGC GTCGATAGAC CACATAAAAA TCGAACAGCG AATGGCCACT
GTGCAGGAGC AAATATCCGG ACTATTGCCG CTTTCAGTAT GGGAAGATAC AGCGGCTGTT
GCTGAAGCAG CCGCCCCGGC TATTGCCTAT ACCCCTCCGC CGGAAGACCG GGTAAAACTC
GAGGAGATGG AAGTCAATAA TATTACCTGC CATGTCGGGC CTGATTCAGG TTGGTATACC
TTGAAACCAT TCCTGGAAGG TACCACGGAG CGCCTGACCG TAGCGATGTA CGAATTTTAT
GCTGAGCACA TTATAAAGAC GGTTACAAAA CTAGGAGAAG ACACAACAGC GGAATTGAAT
ATGATCCTGC AGGTCAGTAC CAATGATGAA ACAATTGAGG AGACATTACG GGAAAGCTGG
GGAGATCGGC TGACTTTTGT ACGAGCATCG GTTTCAGGCC CCAACAGAAT CTTTAACAAC
TCTTATCATA CGAAAGTAGC CGTAAGAGAT TCAAATGCCT TCTGGTTGTC CAGTGGTAAC
TGGAGTCCTA ATAGTCAGCC AGATGTCGTA CCCGGCGCCG ACCAGTTTCC TTACAGAAAA
GGCAACCGGG AATGGCATGT GATCATCGAG GACGCCCCCT TAGCTGTCAT GTATGAAGAA
TTCATCAGGT ACGATATGGA ACAGGCAGCA CAAGTTGGCG CACCGGAAGC CGCCCCTATT
ATGCCGGATC TGCTAATCCC CGCATCGTTC CTCGAACAGG AAGCTGGCGT TATTCAACCT
TTTCCTTTCG AAGCGCAGAC ATTTGCATCC TCAGGTACTC CTGTCAAGGT AAAGCCTTTA
ATGAGCCCTG ATAACTATGC AGAAGAACTC CTCACGTTGA TTGAAAGTGC CACAAAATCC
CTATACCTGC AATTCTCCTA TATCCGGCAG CCATCAAAAG AGGTCTTTGA TCATATCATT
GATGCCATCG CACAAAAAAT GAAAGAAGGA ATTGATGTCA GGGTACTTGT GAGCAGCAAC
CAGAATGCCG ATCATTCAGA TCTCCTCATT GCCAAACGTG GCTGGAAACG CAGTATGTTC
CGCAAGCAAT CAGCTAAAAT GCATAACAAA GGAGTGCTGG TTGATGGTAA AATAGCGGTA
GTCGGCAGTA ATAACTGGTC AACCGACGGC ACCCAATATA ACCGTGATAC CAGCCTTGTA
TTCTACTCCC GCCCCATTGC ACAGTATTTT ACCAAGGTGT TTCTATTTGA CTGGGATAAT
CTGTCCAGTC CTATTGCACG CCAGGAGGAA ATCCAGCCTG TACTGGCCCC GGAATCCGGT
CCTACGCCAC TAGGGATGAT ACGTATTCCC TGGCAGGCAT GGTTTGACGA ATGA
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| Protein sequence | MNSYKGIIRI KDNKALLDAG GIMVELDADP ATFAPYNGCM VTINGNQQGD VVQQATLATT
AELAPAGENG HTSLPAVITA IKTHPELAAI PGLVGLRPGF SENPDAPDLP VIVAVYHPGQ
KPETMPASID HIKIEQRMAT VQEQISGLLP LSVWEDTAAV AEAAAPAIAY TPPPEDRVKL
EEMEVNNITC HVGPDSGWYT LKPFLEGTTE RLTVAMYEFY AEHIIKTVTK LGEDTTAELN
MILQVSTNDE TIEETLRESW GDRLTFVRAS VSGPNRIFNN SYHTKVAVRD SNAFWLSSGN
WSPNSQPDVV PGADQFPYRK GNREWHVIIE DAPLAVMYEE FIRYDMEQAA QVGAPEAAPI
MPDLLIPASF LEQEAGVIQP FPFEAQTFAS SGTPVKVKPL MSPDNYAEEL LTLIESATKS
LYLQFSYIRQ PSKEVFDHII DAIAQKMKEG IDVRVLVSSN QNADHSDLLI AKRGWKRSMF
RKQSAKMHNK GVLVDGKIAV VGSNNWSTDG TQYNRDTSLV FYSRPIAQYF TKVFLFDWDN
LSSPIARQEE IQPVLAPESG PTPLGMIRIP WQAWFDE
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