Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3469 |
Symbol | |
ID | 8359635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4327916 |
End bp | 4330471 |
Gene Length | 2556 bp |
Protein Length | 851 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644965642 |
Product | hypothetical protein |
Protein accession | YP_003123137 |
Protein GI | 256422484 |
COG category | [V] Defense mechanisms |
COG ID | [COG1401] GTPase subunit of restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0603195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.212909 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTTA TTTATACCTG GATCCCTGCC TATAAGGCAA TTGTCGAAAA AATCACTTCT TATCGTAGTA ATCAGCTCAA GTTAATGGAA ATCCTGAAAG AAGCAGGTGC CGATGCATTT AATGATAAAG ATGAATCGGG TAATGTTATT CCATTAACAG AAATTGATCC TTTCACCTTT CTCTGTTGTG GGAATAAATA TGGAGAGGTC CGGAAGAAAC AGGTCCTTAC GAATGTGTGC AGGCTCCTGG ATATTTCGCC ATTGCCGAAG GATGCTTGTG GGATACCCAC GTCAGATGCA AGGAAGCTTT GGTTGTTCCC ATACAAAGCG GAAAGGGTCA ATAATGAAAT AGGACGATTG TGGGATTTCT TTGAGAAATT ACTGGCGGAC CGGCTTACAG ATGCAGACTT TTCGGATATA TTGAAAATAA ACGGAGTTGG AAAAGCGAAG TTGTCTGAAG TGATGTATAT GGTGAGGCCG GCAGATTATT TATGCCTGAA TAGCGCTGTG AAACCATATT TAGCTAAGAA GTATGGCATT AATACGGACT TCAGTTCCTA TACTGAATTT AAGCAATTGT GTCAGAGAAT TCAGGAGGTG GTGCAATTGC CTTTTCATGA GATTTCGTTC AAGGCATATA TAAACAGAGA ATTTGGAGAC AGGATGCCGT CTTATTACAG GATTGGCTCG ACTGAAGAAG GCGTGTCCAG ATTGGACGAT ATGCAAAGTA ATAATATAGT TGCGATAGGG TGGAGTGATA TCGGGAATAT AGAATTATTG GATCCGCTTT CAAAAAGCGG TATTCAGGCG AAGATGCAGG AGATTGGATA CTATAAAGGG AATAAGTCCT CTATTTCCAG GAAGGCGGGA GAGATCTGGC GTTTTTATCA TGAGATAGAA CCAGGAGATA TCGTATTAGT AGCAGATGGC GAGTCTATAA AAGCGATTGG CAAGGTTAGT TCCTACCACT ATGTCTATGA AGACGATCTT GAGTTTCCGC ATTGTCGTTG TGTAGAGTGG TTGAAAAAGG ATATCGAAGA CCTGTATATG ACTGAAGGCG TAATGACTTC GGTCTGGAAA TTTGAATATC CTTACAGCAT TGAAGCCATT GAAAAGTATC TCGGATATGA TGAAAGAACG ATGCCTGCCA ATAATGCTGC GAACATGCTA AAAACAAAGA AGATGAACCT GAACACCATT TTATATGGAC CTCCCGGTAC CGGTAAGACT TATAAATTGC AGCAAATTAT TAAGGACTGG CAATTGGTAG GTAGTAATGA TGTACCGGAC CTTAACTATG AGTTATTTGT TGAAGAATAT AACTGGTGGG AACTGCTGGC AATGGCATTG CTGGATCAGA AGAATGTAAG TGTTCCGCAA CTAAGATTAC ATCCGCTTGT GCAGGCGAAG TTTAATATCA GCACTATAAG AAACCCCGGA TCCAGACTTT GGAGTACGTT GCAGAATCAT ACGGTGCTGA CTTGTGAGAA TGTTTCTAAA CAGGAAAGGG TAGGTGCTAG TCTGATTTTT TATAAGGAGA AGAACTCCAG CTGGCGATTG GATAATGAAG CGGAGTTCAG GTTGTCATTT CCGGAGCTGG TGCAGGATTG GGAGAATTTT AAAAACCCCG AAACAGCAAA GAAGGAGATC AAAAAGTACA TATTTACTAC CTGTCACCAA AGTCTTTCCT ATGAAGATTT TATTGAAGGA ATCAAACCAA AGCTGATAGA CAAGGATGCA GATAATGAAC TAAATGGAGC GAACGTACAA TATGAAGTAC GGAAAGGTAT TTTCTACAAA GCCTGTGTGA AGGCTTGCCA GTTGGCCGGC TATGCGTCAT TGGAAGAGTG TATGAGGGAT ACACCTGATG GTAGAAAAAC GAAATTCGAA ACGGCCATCA TGGAGAACAA TATCATGGTG TTATTCATAG ATGAGATTAA CCGCTGTAAT GTATCCGCTG TTTTTGGAGA GCTGATTACC TTAATAGAAA CGGATAAGCG CCTGGGCGCT ATTAATGAGA TCACGGATAT TATGCTACCC TATTCACAGG AGCTTTTTGC GGTGCCTGCT AATCTTTACA TTATCGGCAC CATGAATACG GCAGATAGAA GTGTGGAGTC GCTGGATACC GCTTTTCGCC GCAGGTTTAG TTTTGAAAGT ATGCAGCCGG ATATTACGAT TCTGAAAGAC GAAGAAATTG ATACGGTCTC CCTGGATAAA TTACTGAGTA CGATTAATGA GAGAATCAGC GTCTTATTGA ATGCGGATCA CCAGATAGGG CATTCTTATT TTATAGGTGT TTCAACAGAA GACGAATTGA AAGCTGTATT CAGCGATAAA ATTATTCCGC TGTTGCAGGA GTATTTTTAT AATGATTATG GAAAGATCGG CTTGGTGTTG GGGACTGCCT TTGTGGAAGC GAGAGAACAA ACGGTATCAT TCGCTAAAGG ATTTCCTTAC GAGAATAAAG AGGATTTAGC AGAGGGACTG ACATATGTGC TGGTACCGGC AGAAGAATGG ACACTGGCAT CTTTTGAATC AATTTACAAG GATTAA
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Protein sequence | MEFIYTWIPA YKAIVEKITS YRSNQLKLME ILKEAGADAF NDKDESGNVI PLTEIDPFTF LCCGNKYGEV RKKQVLTNVC RLLDISPLPK DACGIPTSDA RKLWLFPYKA ERVNNEIGRL WDFFEKLLAD RLTDADFSDI LKINGVGKAK LSEVMYMVRP ADYLCLNSAV KPYLAKKYGI NTDFSSYTEF KQLCQRIQEV VQLPFHEISF KAYINREFGD RMPSYYRIGS TEEGVSRLDD MQSNNIVAIG WSDIGNIELL DPLSKSGIQA KMQEIGYYKG NKSSISRKAG EIWRFYHEIE PGDIVLVADG ESIKAIGKVS SYHYVYEDDL EFPHCRCVEW LKKDIEDLYM TEGVMTSVWK FEYPYSIEAI EKYLGYDERT MPANNAANML KTKKMNLNTI LYGPPGTGKT YKLQQIIKDW QLVGSNDVPD LNYELFVEEY NWWELLAMAL LDQKNVSVPQ LRLHPLVQAK FNISTIRNPG SRLWSTLQNH TVLTCENVSK QERVGASLIF YKEKNSSWRL DNEAEFRLSF PELVQDWENF KNPETAKKEI KKYIFTTCHQ SLSYEDFIEG IKPKLIDKDA DNELNGANVQ YEVRKGIFYK ACVKACQLAG YASLEECMRD TPDGRKTKFE TAIMENNIMV LFIDEINRCN VSAVFGELIT LIETDKRLGA INEITDIMLP YSQELFAVPA NLYIIGTMNT ADRSVESLDT AFRRRFSFES MQPDITILKD EEIDTVSLDK LLSTINERIS VLLNADHQIG HSYFIGVSTE DELKAVFSDK IIPLLQEYFY NDYGKIGLVL GTAFVEAREQ TVSFAKGFPY ENKEDLAEGL TYVLVPAEEW TLASFESIYK D
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