| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3410 |
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| Symbol | |
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| ID | 8359576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4218439 |
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| End bp | 4223784 |
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| Gene Length | 5346 bp |
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| Protein Length | 1781 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965583 |
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| Product | erythronolide synthase, Aspartate racemase |
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| Protein accession | YP_003123078 |
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| Protein GI | 256422425 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.333758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0828019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAATA GTAAAGATGT CGCCATTATT GGTATGAGCG GCGTATTCCC GGAAGCGGAC
GATCTTGGCG CGTTCTACGA AAACCTGAAA ACAGGACGTG ACAGTGTTCG TCCTGTTTCA
GAGACCCGCC TGGGGGCTTC CAGCCTCGAT ATGTCCCTGG TGTACCGTCC GTTTGCCTAC
CTGGAAAGGA CCGACACCTT CGACCATAAA TACTTTCGGA TATCAAAGAG TGAAGCGGAA
ATGATGGAGC CTTCACAACG CCTTTGTCTT GAAATGGCGG TGAAAGCCAT CGAACATGCC
GGTTATAAAC CGGAAGACCT GAATGGCTCC AATACAGCTG TCTATCTGGC TTGCCGTACA
TGGGCCGCTA TTCAGTATTA TCTTCTGGCT AACTACGATG ATAATCCAAA TATTTTCACA
GGTACCCTCA GCTCCATGAT TTATGGCCGT ATTTCCAACT GGCTGAACCT GCAGGGACCG
ACAATGATGA TCGATGCAGC GTGTGCTTCA TCGCTCATTG CTGTTACAGA AGCTTATGAT
AAGCTGGTGA AAGGTGATAT AGACTATGCC ATCGCTGGTG GTCTGGGTAT CAATATTAAC
CTGGCAAAGG TAACCGACCA CGGTCACCTG GGTACCTATA GTCCGGAAGC CCGCTGCAAA
GCATTTGATG CAAGTGCCGA CGGCGTTGTG CCCGGAGAAG GTGGCGGCCT TATTCTCATG
AAACGCCTGG AAGATGCGAT ACGTGATCAT GATACCATTT ATGCAATTGT AAAAGGTGGC
GCAAGTGCCC ACAACGGTAA CCGTTCAAAC GGTATCCTGG CACCAAGTCC GCAGGCACAA
TCATTGGTGA TACAACAGGC ATGGAAAAAT GCAGACGTTG ATCCGGCTAC CATCGGCTAT
ATCGAAGCGC ATGGCACAGG CACCAAACTC GGTGATCCGA TTGAGTTCAG TGCGATCACA
GAAGCCTTCG AAAAGCATGG CGTAAAAGGT AAAACCTGTG CAGTAGGTGC ACTGAAGAGT
AATATCGGAC ACCTCGGCAG CGGCGCGGGT ATTGGTGGTA TTATTAAAGC CGTACTATCG
CTGAAGAATA AAGAGCTGTT CCCTTCATTG CATTTTAATA ACCCCAACCC ATACATCGAC
TTTGAAAATA CCAATGCATA TGTGAACGAC ACATTGCAGG ACTGGAAATC AGAAAAGAGT
CCGAGGAGAT GTGGTGTAAG CGCATTCGGA CTCAGTGGTA CCAATGCGCA TATCATACTG
GAGGAATATG AAAATACCTC TACAAAGACA GCACCGGAGC ATTACCTGCT GAAAGTGTCA
GCGAAATCAG TCGCAGCCTT AAAGCAATAT ACAGCTAACA TAAGCAGCTT CCTGAAAGGA
ATAAACGACT CCTGGGCAGA TGCGCTGTAT ACGCTTAACA GAGGTCGTTC TGATTATGAT
TATAGGGTGT GCTTTACTGC TGACAGCAAA GAAGCATTGC TGCAACAGTT GAATGATTAT
ACGCCCGCCA GTCAGGAACT GACAACGCGT GAAATTATAT TGTTGCTGGG TAACAGCGGT
TTACCTGTCG AGACTCTCGC TGCATATAAC AAAGCGTATC CTGTATTTGC GGCGACTTTT
AACAGCCTGT GTCCAGGATT TCCTGCCATG CAGCCGGAAG AAGACATGTT GGTATTTGCT
ACGAAATATG CTTTGTGTAA GCAGCTGCAG GCATTTGGTA TCAAATTCCC GGTGGTAATA
GGCGCTGGTA TTGGTAAATA TGTATCCCGG GTACTCAGAG GTGAGTTAAC CCTGGAAGCG
GTGCCTGCCC TTCTGAAAGA AGATACTGAA CGTTTACCCG CTGATAAGGA CAAATTCAGG
GCAATTGTAA AGAATCTCCT GGAGAAGAAA GCCCCCCTGT TCCTGGGCCT GGGAACCGAT
CTTACAATGA CTGACCTGTT AAAAGACTGG GCAATAGAAC TGGACATCAG ATCCGGCTCA
ATTGTCAGTC ATCCGGGAAC ACAGGGAGAT CTGATTACCT TATTGTCCGG TCTCTATAAT
AATGGCGTGG CTGTCGACTG GGACGAGCAT TACGCAGGTA AGGTTTACCA GAAAGTAGAA
TGTCCTGTTT ATCCTTTTGA AAAAACCAGG TGCTGGTTCA CCGAGCCAAC CTGGCAAAAG
AAAGAAACAG TGAATGACTG GTATTACAAA CTACACTGGA CTCCGCTTGC GGCAAAAGAT
AAAAGCATCA CTTCATTCAA AGACCGGTTG TTGCTTGTCT TCACAGATAA CGAAGGAGTA
TCTGATGCAC TGATCACTTT ACTGGAAGAA AAAGGTAACC GTTGCGTCCG TGTGAGTCCC
GGTAATGAGT TTGAAATGGT GTCGGATAAG CTGTTCCGTG TGAACTACAC AGAAGAGAAG
GACTATCGGT TGTTATCAGA CAGTCTGCAC GCGCTCTATG GCGTCCTGGA TGGTATCATC
TATCTGAGCG GGTTCTTTAA ACCAATGGCG CCGGCACTTA CAGCAACAGC TGCACAACTA
CAGACTGCCT TCTATGGATT ATTCAACGCA TGTAAAACAT TCTCAAAATA TTTCACTAAA
ACCAATTTCA ACCTGGCAGT ACTGACTGCC AACGTACACG CCGTAGTCGC AGATGATGCG
CAGCTCTCTC CCGTGGCGGC ACTGACCCCG GGTATGATCA AAGCTTCCCT GGCGGAATAT
TATACGCTTC GGACTACCTG CGTGGATGTA GACGGCGAAA AAACAACACC GCAAAGTATT
GCCACGCTTT TGTGGGAAGA GCTGTCCGGC GACGAAGTGA TCCGTTTCGT AGCATACCGT
AATGGTAAAC GCTATGTACA GGAACTGAAC CGCGTGGATG AAGTACAGCA GACAGGCAAT
CCTTACCAGC TGGAACAACA GGGGGTATAC CTTGTTACTG GTGGACATAG TGGTATCGGA
TACGAAATGG CCACGGCACT GGCTACCCGT GCAAAAGCGA CATTACTGAT CATCGGTCGA
CGCTCCGCAG CAGATGTTGC AGGCCAGATC GCGAAGCTGG AACAACTGGG TAGTAAAGTA
CATTACTTCA CAGCCGATAT CAGCAATGAA AGCGATATGC AGACATTGTT TGCTGACATC
AAAAAACGCT TCAGCCGGCT GGCAGGTGTG ATTCATAGTG CCGGTATCGG AAGTAGCGGG
GTTGCCATTG AAAAGCGCAA CATCGCAGAT GTAAACAATA CCTTCGCGCC TAAAGTACAG
GGATCTATTC TCCTTGAAGA ACATACCCGT TCGCTGCAAC CAGGATTTTT TGTGGTATTC
TCTTCCATTG GCGCACTGGT ACCCGCCAGC AGCAGTGCTG ACTACTCAGC TGCCAATATC
TTCCAGGATG CTTTTGCTGC TTATTGGCGT AACAAAGGCC GTAACTTCAT CAGTATTAAC
TGGCCTGACT GGAAAGAGAC AGGATTATCC TACAGGAAAA CCTTGCTGCA ATCTGCAGAA
GAAGTAGCGC TGCGTTATTC CTATCTCTCA CCTATCACCT CCGCGGATGG TATAGAGGCA
TTCTTCAGCG CACTCAGCCA ACGGCAGGAA CGTTTTATTG TAGTAAAAGC GGACTTCAGA
AACTTTATTA TCAACCCATA CTTCAAAATC GGTACGATCA AAAAACTGCA AGGTGAAGAA
CAGGATACAG AGAGCAACTT TGCAGCGTTC ATAGAAAAGA CCGCCAATGG GTTCAGTCCT
ACGGAACTAC AGCTGGCAGG TATCTGGCAC GAAGTATTAA AGCTGGATCA GGTACGCCTG
GAAGATGACT TCTATGAACT GGGTGGTCAC TCCCTGAACA TTATCAGGAT GCTCAACAGA
ATAGAGCAAC AGATGAATGT AACCCTTCCG ATAGAAGAAC TGCTGAGAAA CAGTACGCTG
GGTGGTATCG CAGCACACAT TGATGCCATC CGCCAGACAC AGGAAGTAAA GGTGGCCAGC
GATATCCCGC GCATACAGGA TGCTGAATAC ACCGAACTGT CCCACGCACA ATTGCGTTTC
TGGCTTCTGC ATCAGCCCGT AGCCGGAAGA GAAGCCTATA ACGTTCCCAC AGCTTACCGT
CTGAAAGGAA AGGTAGATAT CAACGCCCTG AGAACTGGCT TGTCGCAATT TGTGAACAGA
CACGAAAGCC TCAGGACAGT ATTTACACTG CAGAAAGGTG TACCGGTACA GAAAGTACTT
CCACTGGAAG AAACCGGATT CTCCTTGCAT GTACATGATC TGAGAGATCA GCCGGATGCA
GCGCAACTGG CGACTGAAAA AGTAAGAGAA GCTGCCGGAA AAGCATTCGA TCTGGCTACA
GGTCCTGTGA TACAGGCATA TCTCTACCAG GTAGCTGATG AAGAATATAT CTTCATGATC
GTCCTGCATC ACATCTCTTC GGACGGCCGT TCAATGGAAA TATTACGGAA TGAGGTACTG
GAATGCTATA GCGCAGCTTT GCAACAACAG ACGCCTGCTT TACCGGCCCT GAATATTCAC
TATAAAGATT ATGCAGCCTG GCAGAATGAG CGCATCCGTA AGGGATACTT CGATGCCCAT
AAAGCTTACT GGAAAGACCG TCTTAGAGGA GTGCAACCCA TCTCGCTGGA AAAACACTTC
GACTATCCGC GTCCGATACA GGAAAATTTC GAAGCCGCAT ACAACGTGTT TTTCCTGCCT
GCGGACATAA CCGCACAACT GAAGGCACTA GGTAATAACA GCACCCTGTT CATCAATACA
CTCCTGATCT ATCAGATACT GCTCGCCGCT TATGCTGATA GCACAGATAT CGTAGTAGGT
ACACCAGTAG GTGGAAGAGA ACATACAGAC CTGGAAAACC AGATAGGTAA TTATCTCAAT
ACCCTGCTGC TTTATACAAA GGTTGATCAG GACCTGCCGT TTAACGAATT GCTGGAAAAA
GTAAAGGAAC AGGTATTCAA AGATTACACT TATCAGGCAT ACCCGTTTGA TATTCTCGTG
GATGAGCTGA AGCTACGCGA TAGTATGAAC GTCTTTGAAA CAGGATTCAC CTGGAATACC
CGTCTGACAG CCGATAATGG TCAGTCCCTG GATTTTGAAA TAGAAGAATA TGCTACCGGT
TTCAATAAAG CAAAAGCTGA TATCTGGTTG CACGTTACAG AACTGAATGA CGGCCTGCAG
ATCGGCTTCC TTTATAAGAC GTCCATTTTC AAAGACGATA CGATCCTGTT ATTGTCTCAG
CGTTTCCGGT CACTCATAGA ACAGTGCATT CAAAATCCCG CTGTCAGGAC AGGAGACCTC
TGTCTGGATA TAGCCACCGA AACCGAAACG GTGAAAGACA AAATAGCATT CGACTTCAAT
TTTTGA
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| Protein sequence | MPNSKDVAII GMSGVFPEAD DLGAFYENLK TGRDSVRPVS ETRLGASSLD MSLVYRPFAY
LERTDTFDHK YFRISKSEAE MMEPSQRLCL EMAVKAIEHA GYKPEDLNGS NTAVYLACRT
WAAIQYYLLA NYDDNPNIFT GTLSSMIYGR ISNWLNLQGP TMMIDAACAS SLIAVTEAYD
KLVKGDIDYA IAGGLGININ LAKVTDHGHL GTYSPEARCK AFDASADGVV PGEGGGLILM
KRLEDAIRDH DTIYAIVKGG ASAHNGNRSN GILAPSPQAQ SLVIQQAWKN ADVDPATIGY
IEAHGTGTKL GDPIEFSAIT EAFEKHGVKG KTCAVGALKS NIGHLGSGAG IGGIIKAVLS
LKNKELFPSL HFNNPNPYID FENTNAYVND TLQDWKSEKS PRRCGVSAFG LSGTNAHIIL
EEYENTSTKT APEHYLLKVS AKSVAALKQY TANISSFLKG INDSWADALY TLNRGRSDYD
YRVCFTADSK EALLQQLNDY TPASQELTTR EIILLLGNSG LPVETLAAYN KAYPVFAATF
NSLCPGFPAM QPEEDMLVFA TKYALCKQLQ AFGIKFPVVI GAGIGKYVSR VLRGELTLEA
VPALLKEDTE RLPADKDKFR AIVKNLLEKK APLFLGLGTD LTMTDLLKDW AIELDIRSGS
IVSHPGTQGD LITLLSGLYN NGVAVDWDEH YAGKVYQKVE CPVYPFEKTR CWFTEPTWQK
KETVNDWYYK LHWTPLAAKD KSITSFKDRL LLVFTDNEGV SDALITLLEE KGNRCVRVSP
GNEFEMVSDK LFRVNYTEEK DYRLLSDSLH ALYGVLDGII YLSGFFKPMA PALTATAAQL
QTAFYGLFNA CKTFSKYFTK TNFNLAVLTA NVHAVVADDA QLSPVAALTP GMIKASLAEY
YTLRTTCVDV DGEKTTPQSI ATLLWEELSG DEVIRFVAYR NGKRYVQELN RVDEVQQTGN
PYQLEQQGVY LVTGGHSGIG YEMATALATR AKATLLIIGR RSAADVAGQI AKLEQLGSKV
HYFTADISNE SDMQTLFADI KKRFSRLAGV IHSAGIGSSG VAIEKRNIAD VNNTFAPKVQ
GSILLEEHTR SLQPGFFVVF SSIGALVPAS SSADYSAANI FQDAFAAYWR NKGRNFISIN
WPDWKETGLS YRKTLLQSAE EVALRYSYLS PITSADGIEA FFSALSQRQE RFIVVKADFR
NFIINPYFKI GTIKKLQGEE QDTESNFAAF IEKTANGFSP TELQLAGIWH EVLKLDQVRL
EDDFYELGGH SLNIIRMLNR IEQQMNVTLP IEELLRNSTL GGIAAHIDAI RQTQEVKVAS
DIPRIQDAEY TELSHAQLRF WLLHQPVAGR EAYNVPTAYR LKGKVDINAL RTGLSQFVNR
HESLRTVFTL QKGVPVQKVL PLEETGFSLH VHDLRDQPDA AQLATEKVRE AAGKAFDLAT
GPVIQAYLYQ VADEEYIFMI VLHHISSDGR SMEILRNEVL ECYSAALQQQ TPALPALNIH
YKDYAAWQNE RIRKGYFDAH KAYWKDRLRG VQPISLEKHF DYPRPIQENF EAAYNVFFLP
ADITAQLKAL GNNSTLFINT LLIYQILLAA YADSTDIVVG TPVGGREHTD LENQIGNYLN
TLLLYTKVDQ DLPFNELLEK VKEQVFKDYT YQAYPFDILV DELKLRDSMN VFETGFTWNT
RLTADNGQSL DFEIEEYATG FNKAKADIWL HVTELNDGLQ IGFLYKTSIF KDDTILLLSQ
RFRSLIEQCI QNPAVRTGDL CLDIATETET VKDKIAFDFN F
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