Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3353 |
Symbol | |
ID | 8359519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4117624 |
End bp | 4118943 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644965526 |
Product | FeS assembly protein SufD |
Protein accession | YP_003123021 |
Protein GI | 256422368 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.315462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGCG ATAAATCATT CTACGAATTT ATATCCAATG GGGTACCCGG ACCTGAGCAG AAAGTGGATG CGGACAACGC AATCATGCCT GCACGTAAGC TGGCTTTCAG CCGCTTCAAG GAACTGGGTC TGCCTACCAT TAAAACAGAA GAGTGGCGCT ATACCAACGT ACAGCGCTTC CTGAAAGATG CTTTCACCCT GGCACAGGAA GAACAGGTGA CTGTAACACC TGATCAGCTG AAAGCTGCCA ACATCCCTCA ACTGGACAGC TACCGCGTTG TACTGGTGAA CGGACGTCTG CAGGCGGATC TTTCCGAACT GCCAGCTGGT GGTAAAATCA CCGTTTCCAA ACTGAGCGAT GCAGCCGGTA ATACACAGCT GCAGGCATGG TTTGACAAAC ACCCCCATCT TCAGTCACAG CCATTCGCTG CACTGAATGC TGCACTGTTT GCCGACGGTC TCTTTATCGA GGCAGGTGTT AATGCAACGC TTGACAAACC TTTACAGATC ATTCACGTAT ATACAGCTTC TGCTAACGCC TTTATTCAGC CACGCCACCT GGTGGTGCTG CATAAAAGCG CTACCCTGGA AATCATCGAA AGCGCTGTAG GTCTCAATGA CTCCGCCATC GCTTTCGTAA ACGCAGTAAC AGAAGTGGTA CTGGAAGAAA ATGCGGAACT CTGGCACTAC AACATCCAGA GCACCATCAA AAACAGCCGC CACATCTATC ATACTTCTGC TACCCAGAAA GCTGATAGCC GTTATCATCA CTTCAATTTC ACCCTGCCTT CCGCAGAACT GACCCGTAAC AACCTCAGCG TAGCGCTGAC AGGCAGCAAT ACGGAAACCA ATCTGCACGG CCTTTACCTT GCTACAGGCA GCCAGCACGT GGATAACCAC ACCTTCGTGG ACCACCTGGT ACCAAACTGT AACAGTAATG AGCTGTATAA AGGCGTACTG CTGGACGACG CTAACGGTGT ATTCACCGGC AAAATCCACG TACACCAGGA TGCGCAGAAA ACAAACGCTT TCCAGCAGAA CAACAACCTG CTGATGAGCG AAAAGGCCAA CATCAACTCT CAGCCACAGC TGGAAATATA TGCAGATGAT GTGAAGTGCA GCCACGGTTT TACCGTAGGA CGCTTCAGCG AAGAATCGCT CTTCTACCTG CGTTCCCGTG GTATTGGTGA AGAAGCCGCC AAGTCACTGC TGGTGAATGC ATTTGCATTT GACATTACCG ATCAGGTACA CATACCGGCA TTACAGGATT TCCTCGCAGA AAAGATCCGC CAGTATGTAG CCGGCGCTAT CAATAACTAA
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Protein sequence | MTSDKSFYEF ISNGVPGPEQ KVDADNAIMP ARKLAFSRFK ELGLPTIKTE EWRYTNVQRF LKDAFTLAQE EQVTVTPDQL KAANIPQLDS YRVVLVNGRL QADLSELPAG GKITVSKLSD AAGNTQLQAW FDKHPHLQSQ PFAALNAALF ADGLFIEAGV NATLDKPLQI IHVYTASANA FIQPRHLVVL HKSATLEIIE SAVGLNDSAI AFVNAVTEVV LEENAELWHY NIQSTIKNSR HIYHTSATQK ADSRYHHFNF TLPSAELTRN NLSVALTGSN TETNLHGLYL ATGSQHVDNH TFVDHLVPNC NSNELYKGVL LDDANGVFTG KIHVHQDAQK TNAFQQNNNL LMSEKANINS QPQLEIYADD VKCSHGFTVG RFSEESLFYL RSRGIGEEAA KSLLVNAFAF DITDQVHIPA LQDFLAEKIR QYVAGAINN
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