Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3330 |
Symbol | |
ID | 8359496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4094315 |
End bp | 4094794 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644965503 |
Product | protein of unknown function DUF395 YeeE/YedE |
Protein accession | YP_003122998 |
Protein GI | 256422345 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0487159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00106524 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATACAG ACTTTGAAGT GGTGAGCACC TCCACTACTA ACAACGCTCC TGCAAAAAAG ACCCCCTGGT GGTCTCAGCT GCAATTCCTG GCCGCTGGTA TATTCTTCGG GATCATCCTG ATCAAATCAG AAGTAATGTC CTGGTACCGG ATACAGGAAA TGTTCCGCTT ACAATCCTTT TACATGTATG GCGTCATCGG TTCGGCGGTC GTGACAGGAA TCATCTCCGT GCTGATCATC AAAAAGACCG GGGCTAAAAC GCTGTACGGC GAACCTATAA CCTTCCAACC GAAGTCCTTT AATAAGGGCC AGATCTTTGG CGGATTGCTC TTCGGATTTG GCTGGGCATT GACAGGCGCC TGTCCGGGAC CATTGTTTGC GCAGATAGGG GCCGGATTCT CCGTGGTAAT CGTTACGCTC TTTAGCGCAA TACTGGGTAC ATGGGTGTAT GGTAAGCTGC GGGACCGCCT GCCGCATTAG
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Protein sequence | MDTDFEVVST STTNNAPAKK TPWWSQLQFL AAGIFFGIIL IKSEVMSWYR IQEMFRLQSF YMYGVIGSAV VTGIISVLII KKTGAKTLYG EPITFQPKSF NKGQIFGGLL FGFGWALTGA CPGPLFAQIG AGFSVVIVTL FSAILGTWVY GKLRDRLPH
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