| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3313 |
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| Symbol | |
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| ID | 8359479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4077347 |
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| End bp | 4079041 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965486 |
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| Product | protein of unknown function DUF477 |
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| Protein accession | YP_003122981 |
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| Protein GI | 256422328 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1512] Beta-propeller domains of methanol dehydrogenase type |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.154866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000293025 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCGACA TCGTATTTAC AAATCTGTTT ATTATTTTTG GTGGGAATAT ATACCTTAAT
ATGGCTCATG TAAAAAAGTG GCGCCTGTGT TTGTTGATCC TGTTGATAGC CGGCGCCTGT
CGTGAAAAAA AGAATGCAGA TTTTGCGGTA GATAAGATAC CGGACCCTAT GCAGCATAAC
AGTTACGTCA GTAACCCGGA TCACCTGATC AGCGATGCGA CCGAACAGAC TTTAAATGAA
CAGATGCGGC AGATGGATCA ATCCGGACGT GCGCAGATAG CAGTTGTACT GTTGGAGACG
ATCGGTGAAA AGGTACCGAA AGATGTTGCG CATGAAATAT TCAGACTTTG GAAACCGGGC
CAAAAGGATA AAAACAATGG TCTGGTTGTC TTACTGGTGA ATGATCAGCA TCGTATTGAA
TTTGAAACGG GCTACGGACT GGAAGGAGAT CTTCCGGACG TGGTTTGTTA TCGTATACAG
CAATCAGAAA TGCTGCCGTC CTTCAAACAG AAAGATCTTG ATGGCGGTAT GCTGAAAGGT
ATGACCGCCG TCGTTAAGGT GTTGAATGAT ACAAATGTAG CGCAGGGTGA TGCACAGGAA
AATGAGGCTG ATGCTGCAGA TGGACTATCC GATACCGCTA TCGCCGCACA GGAGATGATG
ACAAAGATAG ATAGTTTTGT AGCTGCGGAT AGTGCCGGCT TCGCGCAACA ATTTGGTGCT
GTACCTGACA ATAGCGACCC TGTCATAAAT GTAGGAGAAA CATCTCCTGA TTACCCCCAG
GAGACATATA CAGCAAAAGA ACAAGGAGAC GATATGGGGG TCGGCACTTT AGTGCTGTAT
GTCTTCTATG CGATATTCGC TACCATATTC GTGATCCAGA CGGGCAATGC AAAACGCAGA
AAGAATACCA CTTCGCTGTT TAAGACCAAT ATCTTCCATA TGATCTGGAT ATATGGAGCG
CCATTTATAT TGACGCTGGT GTTAATCAAT TTTTTTGATG TGGTATACCG CTGGTGGATA
TTGCCAATAA TTATGTATGG CAACCTGCTG ACTTACCTGA TCTACCGTAC GATTGTCGTT
CACACAAAGG CTGCCTTTCT GCTGAAAACT GCTGACAGAC GCCAGCAATA CGATGCCTGG
AATCAGGCCA ATAAAAGTAC CTGGCTGGCT GGCTTTTTCT TTCCGCTGCC TTTTCTGCTC
TACTCAAAAT GGCATAAAAA ACGCCTGGAA GCACTCCGGT TTGAACCATA TGACTGTGAA
AATTGTCACC AGCAAATGGC AATATTGAAA AAGAAAGAAA AACAACAATT CCTTAACACC
AGTCAGCTGG CAGAAGATAA AGTAGGTTCT GTCATATATG ACGTATGGAA TTGCAAGCAA
TGCAACAGCA GAAAAGTGCT TGGGTATCAG GACCTGGATG TCAATGCCGA CGAGTGTCCA
TCCTGCCATG CCATCACCAT GGTACCCGGC AAAAAGAAGG TATTACGTCG TGCTACCAGC
AGTCGTGAGG GCGAGGGTAT CCAGCATTAT GACTGTAAAC ATTGTAATCA TACAAAGCAG
GAATATTATG TCATCCCAAA GCCATCTTCC GGCAGTTCAG GCAGCTCTGG CTCGTCAAGC
TCTTCCTCTT CATCGTCCAG CAGCAGCTGG GGCGGAGGCA GTTCCGGAGG TGGCGGAGCA
GGTAGCAGCT GGTAA
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| Protein sequence | MSDIVFTNLF IIFGGNIYLN MAHVKKWRLC LLILLIAGAC REKKNADFAV DKIPDPMQHN
SYVSNPDHLI SDATEQTLNE QMRQMDQSGR AQIAVVLLET IGEKVPKDVA HEIFRLWKPG
QKDKNNGLVV LLVNDQHRIE FETGYGLEGD LPDVVCYRIQ QSEMLPSFKQ KDLDGGMLKG
MTAVVKVLND TNVAQGDAQE NEADAADGLS DTAIAAQEMM TKIDSFVAAD SAGFAQQFGA
VPDNSDPVIN VGETSPDYPQ ETYTAKEQGD DMGVGTLVLY VFYAIFATIF VIQTGNAKRR
KNTTSLFKTN IFHMIWIYGA PFILTLVLIN FFDVVYRWWI LPIIMYGNLL TYLIYRTIVV
HTKAAFLLKT ADRRQQYDAW NQANKSTWLA GFFFPLPFLL YSKWHKKRLE ALRFEPYDCE
NCHQQMAILK KKEKQQFLNT SQLAEDKVGS VIYDVWNCKQ CNSRKVLGYQ DLDVNADECP
SCHAITMVPG KKKVLRRATS SREGEGIQHY DCKHCNHTKQ EYYVIPKPSS GSSGSSGSSS
SSSSSSSSSW GGGSSGGGGA GSSW
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