Gene Cpin_3119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3119 
Symbol 
ID8359284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3838384 
End bp3839643 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content50% 
IMG OID644965292 
Productdihydroorotase, multifunctional complex type 
Protein accessionYP_003122788 
Protein GI256422135 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR00857] dihydroorotase, multifunctional complex type 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.317311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.54796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATAT TACTCAAAAA CGTTCAGGTA GTCGCTCCAT CGTCCCCATT TCACGGACAG 
CAGCAGGATA TTTTAATTGA AAACGGCATC ATCCGCCAGA TTGGGACAGG GCTTTCCGCT
CCTCAGGCCA GGGTTGTTTC CGGAGATAAT CTGCACGTAT CCCTCGGATG GACAGACCTT
TTCGCTCATT TCAGCGATCC CGGTCAGGAA TACAAGGAAG ACCTGCAGAG TGGTGTTGAC
GCAGCTGCCA AGGGTGGCTA TACTACCGTG ATGATTGTGC CGAACACCCA GCCGGCCCTT
CATACAAAAG CACAGATAGA ATATGTGATC AGCCGTACCC GCCACAGCGC GGTACAGGTA
CTGCCTATCG GGGCGGTGAC CAAAAACCTG GAAGGAACTT CGCTGGCAGA GATGTACGAA
ATGAGGCTCG CAGGTGCGGT TGCTTTCTCA GACGGATTGA AACCGATCCA GTCACCGGGT
ATTATGCTCA AAGCCCTGCA ATATGTAAAG GCTGTTAACG GTACTATCAT CCAGTTGCCG
GATGACCTCA GCATCTCTTC TCATGGTCTG ATGCACGAGG GTATCTACAG CACACAGCTG
GGTATGCCGG GTAAACCAGC TATCGCAGAA GAACTGATCA TCCAGCGCGA CCTTGAGCTG
GCACAATATA CCGACTCCCG TATCCACTTC ACGGGTATCA GTACACGTAA ATCAGCAGAA
CTCATTGCTA ACGCGAAAGG AAAGGGTATT AAAGTGACCT GCTCTGTGAC GCCTTATCAC
GTTTCGCTGA CGGATGCACA CCTCCTCTCT TACGATTCCA ATCTGAAACT GAATCCTCCA
CTGCGTACAG CTGAAGATGT ACAGGCATTA CGGGATGCGG TGAAAACAGG TGTTATCGAC
TGCTTTGCTA CCCATCACCT GCCACAGGAC TGGGATGCCA AACAGGTAGA ATTTGAATAT
GCAAAGAATG GTATGATCGG CCTGGAAAGC GCCTTCGGCG TACTGCGTAA GTACCTGCCG
GAAGTACCAG TTGAAAGACT GATAGAAATG CTGTCCGCGC AACCAAGAAA GATCTTCGGA
CTGCCGGAAT TGTCACTTTC TGAAGGCGCG ACTGCCAATC TGACTATATT CAATCCGGAA
GAAGAGTGGG TACTCAGCAC GGCGCATCTG GCCAGCAAGT CTAAAAATTC AGCGTATATT
GGCGCGGAAT TGAAAGGCAG TGTGAAAGGA ATCATCAACG GCCAATATGC CCAAGTTTAA
 
Protein sequence
MHILLKNVQV VAPSSPFHGQ QQDILIENGI IRQIGTGLSA PQARVVSGDN LHVSLGWTDL 
FAHFSDPGQE YKEDLQSGVD AAAKGGYTTV MIVPNTQPAL HTKAQIEYVI SRTRHSAVQV
LPIGAVTKNL EGTSLAEMYE MRLAGAVAFS DGLKPIQSPG IMLKALQYVK AVNGTIIQLP
DDLSISSHGL MHEGIYSTQL GMPGKPAIAE ELIIQRDLEL AQYTDSRIHF TGISTRKSAE
LIANAKGKGI KVTCSVTPYH VSLTDAHLLS YDSNLKLNPP LRTAEDVQAL RDAVKTGVID
CFATHHLPQD WDAKQVEFEY AKNGMIGLES AFGVLRKYLP EVPVERLIEM LSAQPRKIFG
LPELSLSEGA TANLTIFNPE EEWVLSTAHL ASKSKNSAYI GAELKGSVKG IINGQYAQV