| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3102 |
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| Symbol | |
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| ID | 8359267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3823993 |
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| End bp | 3824661 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644965276 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003122772 |
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| Protein GI | 256422119 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.774177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.15342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGTAT ACTCGAAAAA GAAATCTCAG GATAACATGG ATATTATTTC TGTGGCGATT
GTTGAAGACA ACCATGATAT CCGTACAGCC ATGGAATTGT TGATTAATGG CTCTGATGGG
TATGCTTGTA TAGGCGCATT TAATAATGCG GAGACTGCGG TGGAACAGAT CCCCAGTTTG
TTACCCAACG TTGTGCTGAT GGACTTTAAC CTTCCGGGCG GCATGAATGG AATCGAGTGT
ATTGCGCGTT TAAAAGGAGA ATATCCCGAT ATGCATTTTA TGATGTTGAC GGTGTATGAG
GATGATGACA AGATCTTCCA GGCACTGGAA GCAGGTGCAA GTGGTTATAT ATTGAAAAAA
ACGCCTCCCA GCGAGTTGTT GAGTGCTATC AGAGACCTGC ATGAAGGCGG TTCTCCTATG
AGTTCTCAGA TTGCCCGTAG GGTAGTGGCA TATTTCCAGA AGCAGGCGAA GCCGAATCCG
GCGCTGGAGG CATTGACTTC CAGGGAGAAA GAGATCCTGG ACCAGCTTTC TAAAGGATTT
TTATACAAGG AGATCGCGAG CAATCTGTTT ATCAGTATAG AGACGGTGCG CAGACACGTG
CATAATATCT ATGAGAAACT GCATGTAAGG AGCCGTACAG ATGCTGTTAA CAAGTATTAC
AACAGGTAA
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| Protein sequence | MTVYSKKKSQ DNMDIISVAI VEDNHDIRTA MELLINGSDG YACIGAFNNA ETAVEQIPSL
LPNVVLMDFN LPGGMNGIEC IARLKGEYPD MHFMMLTVYE DDDKIFQALE AGASGYILKK
TPPSELLSAI RDLHEGGSPM SSQIARRVVA YFQKQAKPNP ALEALTSREK EILDQLSKGF
LYKEIASNLF ISIETVRRHV HNIYEKLHVR SRTDAVNKYY NR
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