| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2958 |
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| Symbol | |
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| ID | 8359121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3643086 |
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| End bp | 3643979 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644965139 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003122637 |
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| Protein GI | 256421984 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000000611309 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTAAAA CAAACAAGTC CATTCCTGTC AATCACTTCG ACGACACGTA TAACTCAGGC
ATGTCTATTG AAAAAATATT CATCAAAAAC TTACGCTCTT TAGAGGAATT AGCCGAGGTC
GAAGATATTG ATACTATTGA GGGAATTGCG GAAGCCCACC GGCATGATCG TCACTCCTTC
TACCTGGTTG AAGGCGGAAC GCTTTCGATG GACATTGACT TTGAACATTA CAAAATAAAG
CCTTCATCCA TCATGTACAT GCATCCTGAC CAGGTACACC GTACAATGGA ATTTAAGAAT
GTGACGGTTG TCAGTCTGGC GATCAATAAC GAAAACCTAC ATTCTGAATA CCTGCAGCTC
CTGGAGGATA TCACACCTGT CAAACCTTTG GTATTAAAGA AAGAGACTTT CGATACCATT
GCAGAAGCGG CCGCGCTCTT CATACAATTA TCCAAACGGG ATTATAACAA GGTATACCAT
ACTTTATTAA AAGACTGTTG TAATGCACTG GTTGGGTTGA TCATCGGACA ATACCTGGAA
CAATCCAAAC CGGCTGATAA ACTCTCCCGG TTTGAAATCG TCACCCAATC CTTCCGGAAG
CTATTAGACC GCACATTTAC TACTGTAAAA CGCCCCGCTG AATATGCCCA GCAATTAAAC
TTATCTACAC CCTACCTGAA CGAATGTGTC AGGAATACTA CTGGCTATTC TGTTTCCTAT
CACATACAAC AACGCGTTAT TTTAGAAGCC AAACGACTGC TTTATCATTC CGACAGATCT
GTAAAAGAGA TAGCTACTAT ATTGGGCTAT GATGATTACC CCTACTTTTC ACGCCTGTTT
ACCAAAGTCA CCGGTATGAC GCCGCTGGCT TTCCGGAACA AAAACCTCGA TTAG
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| Protein sequence | MRKTNKSIPV NHFDDTYNSG MSIEKIFIKN LRSLEELAEV EDIDTIEGIA EAHRHDRHSF
YLVEGGTLSM DIDFEHYKIK PSSIMYMHPD QVHRTMEFKN VTVVSLAINN ENLHSEYLQL
LEDITPVKPL VLKKETFDTI AEAAALFIQL SKRDYNKVYH TLLKDCCNAL VGLIIGQYLE
QSKPADKLSR FEIVTQSFRK LLDRTFTTVK RPAEYAQQLN LSTPYLNECV RNTTGYSVSY
HIQQRVILEA KRLLYHSDRS VKEIATILGY DDYPYFSRLF TKVTGMTPLA FRNKNLD
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