| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2954 |
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| Symbol | |
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| ID | 8359117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3635495 |
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| End bp | 3637906 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644965135 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003122633 |
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| Protein GI | 256421980 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00584136 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAGGAA GTTATGTCAA AACATCCACA CGCAATTTAT TGCGCAATAA GCTATTCTCC
TGCATCAGTA TTGTTGGTCT TGCCATCAGT ATGTCTGTCG GCTTATTACT TATTGCTTTT
GTACTGGATC TGCGATCTTA TGACAGGTTC CATAAGAACG GTGAGCGGAT CTACCGGATC
TCCAGTGTGG CTACATTCAA GGGAGAACAA GGTGGCAAAT ATGCATCTGC ATCCATAAAA
ACCGGGAAGT TGATAAGAGA AAAGCTGACA GGCATTGAAG AGGTGGCTAT TTTACGGAAT
GATTTCTCGC AGGACGCGCA GGTTGGCGAC CATATTTTGC CTATCAAGGG CTTCTGGGCG
GAACCTTCGT TCTTTCGCAT CTTTACCTTT CCGATGCTGC AAGGCAATGC GGCGACGGCT
TTAAGAGACC CTTATTCGAT TGTGCTGACA GAGACGGCGG CCAGGAAACT ATTTGGCAAT
AAAGATGCGA TGGGCAGCAT GATCAGGTTT GATACACTCG AATATCGTGT GACTGGTGTA
ATGAAGGATG TTCCTTTCTT TTCACATATC CATTTTGAAG CGTTAGTGTC ACTGTCGACC
GCCGATCAGC TCAATAAAAA TGATCCGCAC TTCGGAGACT GGACTAATAT ATGGTCTAAC
TTCGTGTATA TCCTGCCATC GAAAAATGCC GACATGGCGG CTATTCAGTT GCAACTCGAT
GCCATTGCAA AAGAAGAAAA CCTGGCTGAC AAAGATACCC GGATCCAGCT TTCGCCGCTT
CCGCTATATA ATATTGTAGT TGGAGAGAAT CTGCGTCGTT CAGAGGGAGG ACCTGGTTAC
GTAGGACCGC ATGTGCCACC AGTCGTACTT GGGCTACTGG GTGGACTTGC ATTGGTTGTG
ATACTGTCTG CCTGTTTCAA CTATACCAAT CTTTCGATCG CACGTGCCAT GCGCCGTTTT
AAGGAAATAG GTATCCGTAA AGCCATCGGC GCCGGTGCAA GCCAGGTAAG GCTGCAGTTT
CTTGCGGAAG CAGTTATGAT CTCTCTGATA GCCCTTTTAC TCTCATTCCT GCTTTTCCTA
CTATTACGTC CACAGCTTAT CCATCTGGCT CCGGAAATGC AAGGTACCGT GAAACTTGAC
CTGACTCCGG CTATGATCAT TTCCTTTATC GTCTTTTCTG TCACTGTAGG CGTTATTGCC
GGTTTCATGC CTGCCATCTT CTTTTCAAAG GTTAATGCTA TCAATGCGCT CAGGAATGTA
TCATCTGTAA AAGTATTCCG GCACCTGACA CTCAGGCGGG CCCTGGTCGT GATACAATAC
ACGGTCACGT TAATCTTTAT AACGGCCACC TCGATAGCTT ATGTACAGTA TAAAAATATC
CTTGCATTCG ACCTGGGCTT TCGTACAACA AACATTCTGA ACATCTATAC GGAGGGTAAT
AAACCCAATG TATTGCTTAA TGAACTGCGT GAGATACCGG AGATTACTGC ACTATCCAGG
TCTCTGATCG TTACCGGAAT AGGCAATTAC TGGGGTGGTA ACATGAAATA TAAAGATGTC
AATGACTCCA CCCTGGTCAT GACCAATCAT GTCGACGAAA ACTATTTACC ACTGCATGGA
TATAAGCTTA TTGCCGGCGG AAATTTTATT TCAAGACCGA CTACAGCAGA AGCTGTCAGC
GAGGTAATTG TTAACGAACA GGTGCTTAGG CGATTCAATA TAGGCATCCA TGCTCCCGAA
AAAGCAATCG GCGAACAGGT AATGTTGAAC GGTCGCAAAT TGACGATTGT AGGAGTTATG
CAGGACTTTC ACTATGGCAA GGTTGAAAAT CTCATCGGAC CGGTAGCATT CACCTGCTGG
ACACCGGAAG ACAGGGCGGT TATTAACGCC AGCGTAAAAA GCGATGATAT GCCGGCGACT
ATGGCTAAAA TTGAGGCGGT GTGGAAGAAA TTCGATCGTG TACATCCATT CAATGCTACA
TTTTACGACC AATCGATAGA AGATGCATAT AGTGAATTTT CTATCATGAT TAAGATTATT
GGATTTCTGT CGTTTCTTGC TATTTCTATC GCTTCGATGG GGCTGTTCGG TATGGTAGTA
TTCACCACCG AGACACGACT AAAAGAGATC AGCATCCGGA AGGTGATGGG CGCCAGTTTC
GGCAACCTTA TATACCTACT GAGCCGTAAC TTCCTTTTAT TACTATCGAT ATCCGCAGTC
ATCGCGCTGC CCGTCACATA TCTCTTCTTT GAGAAAGTTG TGTTGAGTAA CTTTCCATAT
CATACACCTG TTCAGATTGT CGAGTTGTCT ATTGGATTTT TGGCAGTACT GCTGATTGCA
ATTATTATGA TCGGGTCACA GACGATGAAA GCGGCGAGGG AAAATCCTAT AGCGGTACTG
AAAAGTGAAT AA
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| Protein sequence | MIGSYVKTST RNLLRNKLFS CISIVGLAIS MSVGLLLIAF VLDLRSYDRF HKNGERIYRI
SSVATFKGEQ GGKYASASIK TGKLIREKLT GIEEVAILRN DFSQDAQVGD HILPIKGFWA
EPSFFRIFTF PMLQGNAATA LRDPYSIVLT ETAARKLFGN KDAMGSMIRF DTLEYRVTGV
MKDVPFFSHI HFEALVSLST ADQLNKNDPH FGDWTNIWSN FVYILPSKNA DMAAIQLQLD
AIAKEENLAD KDTRIQLSPL PLYNIVVGEN LRRSEGGPGY VGPHVPPVVL GLLGGLALVV
ILSACFNYTN LSIARAMRRF KEIGIRKAIG AGASQVRLQF LAEAVMISLI ALLLSFLLFL
LLRPQLIHLA PEMQGTVKLD LTPAMIISFI VFSVTVGVIA GFMPAIFFSK VNAINALRNV
SSVKVFRHLT LRRALVVIQY TVTLIFITAT SIAYVQYKNI LAFDLGFRTT NILNIYTEGN
KPNVLLNELR EIPEITALSR SLIVTGIGNY WGGNMKYKDV NDSTLVMTNH VDENYLPLHG
YKLIAGGNFI SRPTTAEAVS EVIVNEQVLR RFNIGIHAPE KAIGEQVMLN GRKLTIVGVM
QDFHYGKVEN LIGPVAFTCW TPEDRAVINA SVKSDDMPAT MAKIEAVWKK FDRVHPFNAT
FYDQSIEDAY SEFSIMIKII GFLSFLAISI ASMGLFGMVV FTTETRLKEI SIRKVMGASF
GNLIYLLSRN FLLLLSISAV IALPVTYLFF EKVVLSNFPY HTPVQIVELS IGFLAVLLIA
IIMIGSQTMK AARENPIAVL KSE
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