Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2945 |
Symbol | |
ID | 8359108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3623092 |
End bp | 3624036 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644965126 |
Product | ABC transporter related |
Protein accession | YP_003122624 |
Protein GI | 256421971 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.760604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGATA ATATCGTAAA AATCGAAGGA CTGTTTCACC GTTACAGTAA AGACTGGGCG GTGCAGGACA TCAACTTCGA GATCAACAGG AACGGTATTG TAGGACTACT CGGTTCCAAT GGCGCCGGAA AATCTACAAC CATGAACATC CTTTGCGGCG TATTGAGCCA AACCCGTGGC CAGGTGTTAA TAGAAGGCAT CGACATGCGT ACTGACCCGG AAGAAGCCAA AAAACGGATC GGCTTTTTGC CGCAAAACGC CCCGCTGTAC CTTGAACAAA CCGTAGACGA ATACCTCACT TATTGTGCGC ACCTGCGGTT GATAGAAAAA CGAAAGATTC GCGAATCCGT GGACAAGGTG AAAGAAAGAT GCGGCGTAGC GCATTTCAGC AAAAGGCTGA TCGGTAATTT ATCCGGCGGC TACCGGCAAC GGGTAGGCAT TGCCCAGGCG ATCATTCACC GCCCATTGCT CGTTGTCCTG GACGAGCCCA CCAACGGCCT CGATCCTAAC CAGATTCTGG AAGTACGACA ACTGATCAAA GAAATTGCGA CAGACCGCTC AGTAATTTTT TCTTCCCATA TCCTTTCGGA AATACAGGCT ACCTGCCAGG ATATCATCAT GATTGAAGGT GGCAAAATCG TGTTTAAAGA CACGATGGAT ACTTTCAACA ATTACATCGA ACCGGATAGC CTGGTGGCCA CCATGGAAAA TCCACCTGCA GCTGAAGAAC TGAGGGCAAT CGGAGGCGTA AAAGAAGTAG TGTTCCTCAC GGAAAAAACC GTTCGTATGC GGTTCGATCC CACCGCGGAC ATTGCAGAAG AACTGGTGGA AATGAGCGTT CACCGCAAAT GGCGCCTGAA AGAAATCACA CTGGAGAAAA GTTCGCTCGA TGCCATTTTC GCACAGTTAT CCAACAAAAC ATTTAAACCA TCCGTTCAAT CATGA
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Protein sequence | MQDNIVKIEG LFHRYSKDWA VQDINFEINR NGIVGLLGSN GAGKSTTMNI LCGVLSQTRG QVLIEGIDMR TDPEEAKKRI GFLPQNAPLY LEQTVDEYLT YCAHLRLIEK RKIRESVDKV KERCGVAHFS KRLIGNLSGG YRQRVGIAQA IIHRPLLVVL DEPTNGLDPN QILEVRQLIK EIATDRSVIF SSHILSEIQA TCQDIIMIEG GKIVFKDTMD TFNNYIEPDS LVATMENPPA AEELRAIGGV KEVVFLTEKT VRMRFDPTAD IAEELVEMSV HRKWRLKEIT LEKSSLDAIF AQLSNKTFKP SVQS
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