Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2943 |
Symbol | |
ID | 8359106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3619625 |
End bp | 3620473 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644965124 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003122622 |
Protein GI | 256421969 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.599912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGC AAAAAGTTTG GTTTATAACA GGCGCATCAA AAGGCTTTGG ATTGGAAATA GCCAAAGCAG CACTTAAAGC CGGTGATAAA GTTGCGGCAA CAGTCAGAGG CAATGCCGAA AATCTTAAAG CGATATTTAA CAACGAAGAG AATGCATTGG TTGTGACACT CGACGTTACC AAAGAGGATC AGGTAAAGCA AGGTGTACAG GATGCTATAA ACAAATTCGG ACGCTTAGAT GTATTGGTTA ATAATGCTGG ATATGGCTTG CTTGGCGCTA CCGAGGAAGT ATCCGACTAT GAGGTAAGAA AACAATATGA CACCAATGTT TTCGGTTTAC TGAACGTTAC CAGGGCTGTT TTACCTCATA TGCGAAGCCA AAAGTCCGGA CATATTATTA ACATATCTTC ATTACTTGGC TATACGGCAT CTGTGCCTGG CTTTGGCCTT TACGGCTCAA CTAAATTTGC AGTTGAAGGT ATAACTGAAG GGTTAGCACT TGAAGTAAAA CCATTAGGCA TATATGTTAC AACAGCTGCT CCTGGATATT TCAGAACAAA ATTTGCTTCA ACTGAATCAT ATCAGGCGTC TGAGATTAAA TTAGATGCAT ATAAAGAAAC GGTAGGGCAT ATTAGGGAGT TTATTAGTCA GATAGACGGT AATCAGCCGG GCGACCCCGT AAGACTTGCA CAGGCAATTA TTAAATTGGC CGCCAGCGAA AATCCGCCAA TACATCTGCC TTTAGGGTCT GATTCGGTAG CTGCATTCCG GATGAAAACG GCGCAGGCTG GAAAAGAAGT AGATGAATGG GAAAACATAT CTAATAGTAC GGATTATCCG AAGAACTAA
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Protein sequence | MKKQKVWFIT GASKGFGLEI AKAALKAGDK VAATVRGNAE NLKAIFNNEE NALVVTLDVT KEDQVKQGVQ DAINKFGRLD VLVNNAGYGL LGATEEVSDY EVRKQYDTNV FGLLNVTRAV LPHMRSQKSG HIINISSLLG YTASVPGFGL YGSTKFAVEG ITEGLALEVK PLGIYVTTAA PGYFRTKFAS TESYQASEIK LDAYKETVGH IREFISQIDG NQPGDPVRLA QAIIKLAASE NPPIHLPLGS DSVAAFRMKT AQAGKEVDEW ENISNSTDYP KN
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