Gene Cpin_2943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2943 
Symbol 
ID8359106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3619625 
End bp3620473 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content41% 
IMG OID644965124 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003122622 
Protein GI256421969 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.599912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC AAAAAGTTTG GTTTATAACA GGCGCATCAA AAGGCTTTGG ATTGGAAATA 
GCCAAAGCAG CACTTAAAGC CGGTGATAAA GTTGCGGCAA CAGTCAGAGG CAATGCCGAA
AATCTTAAAG CGATATTTAA CAACGAAGAG AATGCATTGG TTGTGACACT CGACGTTACC
AAAGAGGATC AGGTAAAGCA AGGTGTACAG GATGCTATAA ACAAATTCGG ACGCTTAGAT
GTATTGGTTA ATAATGCTGG ATATGGCTTG CTTGGCGCTA CCGAGGAAGT ATCCGACTAT
GAGGTAAGAA AACAATATGA CACCAATGTT TTCGGTTTAC TGAACGTTAC CAGGGCTGTT
TTACCTCATA TGCGAAGCCA AAAGTCCGGA CATATTATTA ACATATCTTC ATTACTTGGC
TATACGGCAT CTGTGCCTGG CTTTGGCCTT TACGGCTCAA CTAAATTTGC AGTTGAAGGT
ATAACTGAAG GGTTAGCACT TGAAGTAAAA CCATTAGGCA TATATGTTAC AACAGCTGCT
CCTGGATATT TCAGAACAAA ATTTGCTTCA ACTGAATCAT ATCAGGCGTC TGAGATTAAA
TTAGATGCAT ATAAAGAAAC GGTAGGGCAT ATTAGGGAGT TTATTAGTCA GATAGACGGT
AATCAGCCGG GCGACCCCGT AAGACTTGCA CAGGCAATTA TTAAATTGGC CGCCAGCGAA
AATCCGCCAA TACATCTGCC TTTAGGGTCT GATTCGGTAG CTGCATTCCG GATGAAAACG
GCGCAGGCTG GAAAAGAAGT AGATGAATGG GAAAACATAT CTAATAGTAC GGATTATCCG
AAGAACTAA
 
Protein sequence
MKKQKVWFIT GASKGFGLEI AKAALKAGDK VAATVRGNAE NLKAIFNNEE NALVVTLDVT 
KEDQVKQGVQ DAINKFGRLD VLVNNAGYGL LGATEEVSDY EVRKQYDTNV FGLLNVTRAV
LPHMRSQKSG HIINISSLLG YTASVPGFGL YGSTKFAVEG ITEGLALEVK PLGIYVTTAA
PGYFRTKFAS TESYQASEIK LDAYKETVGH IREFISQIDG NQPGDPVRLA QAIIKLAASE
NPPIHLPLGS DSVAAFRMKT AQAGKEVDEW ENISNSTDYP KN