| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2929 |
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| Symbol | |
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| ID | 8359091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3607031 |
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| End bp | 3607822 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965110 |
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| Product | RNA methyltransferase, TrmH family, group 3 |
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| Protein accession | YP_003122609 |
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| Protein GI | 256421956 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAAC GAAAATTTAA GAAGCCTGGC GGTTTCCGTC AGCATGCTCC CAGGCCCAAG
GCATCATCTC TGGTGATTGG CAGACAGCCA ATTGTGGAAG CGATGAAAGC AGGCAAGGCC
ATTGAGCGTA TTTTTATGTT GCGCGGTGCA ACAGGGGAGA TTATCCCTCA GATCAGACAG
TTAGCAGAAC AATATAATAT TCCGATAAAT CTGGTTCCGG TAGAGAAACT GAACGGGTTA
ACCTCTGCCA ATCACCAGGG CTGTGTGGCC ATCACTGGCA ATATCAACTA CCTGGATCTT
CAGGATGTGA TATCTCATGT AACCGAACAG GGCCAGACTC CTTTATTCCT GATCCTGGAC
GGTATTACCG ACGTCCGTAA TATCGGCGCC ATTGCCCGTA GTGCAGTGTG TTGCGGGGCT
CAGGCAATCA TTATCCCTGA CAGAGGAATT GCTGCCCTGA ATGAGGAAGC GATTAAGTCT
TCTGCAGGAG CATTGGAAAC AATCTCCGTA TGCCGGGTGA ACAGTCTGTT GAAAGCGATT
GATACCCTCC ATCTGAATGG TATCAAGGTG ATTGCCAGCG AAATGGAGGC TGAAACAAAG
CTCTATGACT GTCAGCTGCA GGAGCCGGTA GCAGTAATTA TGGGATCGGA AGACAAAGGC
GTGTTCCCGG CATTGATAAA AGCTTCGGAT ACCCTGTTCC ACATTCCTAT GGCCGGAAAC
TTTGAGTCAT TCAATGTCTC TGTTGCGGCG GGCATTATCC TGTATGAGGC CATGAAACAG
AGAGGCGCAT AA
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| Protein sequence | MEQRKFKKPG GFRQHAPRPK ASSLVIGRQP IVEAMKAGKA IERIFMLRGA TGEIIPQIRQ
LAEQYNIPIN LVPVEKLNGL TSANHQGCVA ITGNINYLDL QDVISHVTEQ GQTPLFLILD
GITDVRNIGA IARSAVCCGA QAIIIPDRGI AALNEEAIKS SAGALETISV CRVNSLLKAI
DTLHLNGIKV IASEMEAETK LYDCQLQEPV AVIMGSEDKG VFPALIKASD TLFHIPMAGN
FESFNVSVAA GIILYEAMKQ RGA
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