| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2907 |
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| Symbol | |
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| ID | 8359069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3586331 |
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| End bp | 3586999 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965088 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003122587 |
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| Protein GI | 256421934 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0590247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCACG ACATCCGATT AGTGATAGCT GACGATCATG AGATATTCCG TGACGGACTT
GCATTAATGC TTTCAAGACA ACCTGACATT ACCCTTGTAG GGCAGGCCAA CAATGGCAGG
GAATTACTGG AACTACTGAC AAGCGTCGAA GCGGACGTAG TCATGACTGA CCTTAAAATG
CCTTTGATGG ATGGCATTAC GGCTACCCGT GCATTACTAC AACGTAATCC AGACATTAAG
ATCATTGCTT TGTCGATGTT TGATGAAGAG GAGCTCATTG TGGAAATGCT GGAAGCGGGT
GCAAAAGGTT ATCTGCTGAA GAATGCAGAT AAACAGGAGA TCATCGAGGC GATTAACAGC
GTGTATGAAG ATCATATTTT CTATTGCCGG CAAACTTCGG CCAGGCTGGC GGCGATGATT
GTCAAGAGTC GTTTTAATCC TCCCAGAGAG AATAATGCGG TCACTTTCAC CGACAGGGAG
AAAGAGATTA TCCGGCTGAT CTGTCAGCAA TTTACCGCCC AGGAAATAGG TGATAAGATA
TTTCTGAGTA AGCGTACAGT GGAGGGACAC CGCACCCGCA TCCTGGAAAA AATGAATGTC
AAGAATACCG CCGGTGTCGT GGTTTTCGCC CTGAAAAACA ACCTCATCAG TGAGGCTGAA
CTGCTCTGA
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| Protein sequence | MNHDIRLVIA DDHEIFRDGL ALMLSRQPDI TLVGQANNGR ELLELLTSVE ADVVMTDLKM
PLMDGITATR ALLQRNPDIK IIALSMFDEE ELIVEMLEAG AKGYLLKNAD KQEIIEAINS
VYEDHIFYCR QTSARLAAMI VKSRFNPPRE NNAVTFTDRE KEIIRLICQQ FTAQEIGDKI
FLSKRTVEGH RTRILEKMNV KNTAGVVVFA LKNNLISEAE LL
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