Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2880 |
Symbol | |
ID | 8359041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3558400 |
End bp | 3559770 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644965060 |
Product | hypothetical protein |
Protein accession | YP_003122560 |
Protein GI | 256421907 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCGTT ATAGTTATAC CTTACTTTTT CTCATACTGG GTTGTTCGGT ATTCACCGGC TGTGACAAGT ACCTGGATAT TCAACCGAAA GGCAAAACCC TTTTATCTAC AGTGAACGAT TATGACCAGT GGTTGAACGC TCCATCACTT GCCAATAGTT TCGGGGCTCC TTTCGGGTAC ACCAACTTCA TGACTGATAA TGTCGATTTC GTAAACGCAG CGACACCCCC AACTACGCCA CAGGAACTCC TGTATACCTG GTCACTACAG TTTACATCAG ACGTTGTTAG TGCGCCGGTT TTGTGGGGTG AGCATTATGC ACACATTAAC CACTACAATA CTGTTGTTTT AGGCATTGAT ATGGCGACCA ACGGAACAGG AAGCCAAAGG AGAGCATTGA GAGCGGAAGC ACTGCTTGGC AGATCGCTGG AATACTTTTA CCTGGTAAAT GAATATGGAA ATCCTTATGA CTCAATGACG GCTGGTAAAG ATCTTGCAGT TCCGTTTGTA ACATCCAATG ATGTCACACA AACAGTACCA GGGAGAAGTA CGGTTGACGA AATCTACAAA CATATCATTG ATGATACCAA CGAAGCCCTT GCTGATTTGC CGGTAAATAA CAGCATGAAC CGACTGCGTG GTTCCCGTGC AGCAGCATAC AGTTTATTGG CCAGGATCTA CTTCTATGCA CGTAACTATA CTGAGGCCAG CAAGAATGCA GAACTTGCGC TGAATAATAC GCAGGCAACA ATGATCAACC TGAATGGGCC GCTTCCTACG TCGGACCAGG TAGGCGTCCG TCCTGACGTT ATATATGGCA GATTTGTTCT TGGCAACTTC CCCGCAGCTT TAGATTTTAT GCGCTCTTTT GCCGGCAACG ACCTGCGGGT GACCCGGATG TACTACAGTC TGGACAATTA TCAATATACA ACCCGGGGAG CAACTTCATT TATTCCCCTG CAGGTTACGC CATCTCTACA ATATGTTAAT ACTGGTACGT CGATACAGGA GATGAAACTC ATTATTGCTG AAAACGCTGC CCGAAATGGA GAGCTGTCAG TTGCCTTGCA GCAACTGGAT GACATACGTA AAAACAGATT TGCCGCATCG AGCTATGTGC CTTTTCAATC TTCCGATAAA GACGAAGTAC TGGAGGAAGT CCTGCTGGAA AGGAACCATG AATTGGCATT TTCAGGATTG CGCTGGTTCG ACATGCGAAG ACTGGATAAA GAAAACAGGA TGGGAACAGT GACCAGGTAC GATGCCAACG GGAATGTCAT TGCCACACTA CCTCCGCATA GCAGCCGATA TACGCTGCAA ATACCAACTC AGGTTTTAAG TTTTAATCCG GGAATGCCAC AAAACCCATA A
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Protein sequence | MHRYSYTLLF LILGCSVFTG CDKYLDIQPK GKTLLSTVND YDQWLNAPSL ANSFGAPFGY TNFMTDNVDF VNAATPPTTP QELLYTWSLQ FTSDVVSAPV LWGEHYAHIN HYNTVVLGID MATNGTGSQR RALRAEALLG RSLEYFYLVN EYGNPYDSMT AGKDLAVPFV TSNDVTQTVP GRSTVDEIYK HIIDDTNEAL ADLPVNNSMN RLRGSRAAAY SLLARIYFYA RNYTEASKNA ELALNNTQAT MINLNGPLPT SDQVGVRPDV IYGRFVLGNF PAALDFMRSF AGNDLRVTRM YYSLDNYQYT TRGATSFIPL QVTPSLQYVN TGTSIQEMKL IIAENAARNG ELSVALQQLD DIRKNRFAAS SYVPFQSSDK DEVLEEVLLE RNHELAFSGL RWFDMRRLDK ENRMGTVTRY DANGNVIATL PPHSSRYTLQ IPTQVLSFNP GMPQNP
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