| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2750 |
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| Symbol | |
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| ID | 8358911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3374045 |
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| End bp | 3377275 |
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| Gene Length | 3231 bp |
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| Protein Length | 1076 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644964930 |
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| Product | peptidase S41 |
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| Protein accession | YP_003122430 |
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| Protein GI | 256421777 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.956539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.394913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAC TACTACTTGC CTTGACGATG TGCTGTACTG CCGGCTTTAG CCAGGCGCAG
GATAATGCAC AATGGCTACG ATATCCCGCT ATCTCTCCTG ATGGTAAAAC CATCGCCTTC
GGTTACAAAG GAGACATCTA CCGCGTAGAT GTAAATGGTG GGGTTGCAGT ACCTGTCACC
ATTCATGAAG CACAGGACAT GATGCCCGTA TGGAGCCATG ATGGTAAATA CCTGGCTTTT
GCCAGTGACC GCTACGGTAA CTTTGATGTA TTCGTAATGC CTGCTACCGG CGGTACCCCG
GTTCGTCTGA CCTACAACAG CGCCAGCGAT TATCCTTACG ACTTCTCACC TGATAATAAA
CAGGTACTTT TCGGCAGCTC CCGTAATGCA CCTGCTGCGA GCGTGCGCTT CAGCTCCGGA
CTGTTTGCCA ATCTGTATAC CGTACCTGTT ACGGGTGGCC GTTCCCTGCT GGTAAGTGCC
GCCGGCGCAG AAAATGCCCA CTATAACAGC AAAGGCACAC AGATCATTTT TCAGGACAGG
AAAGGCTATG AAGATCCATG GCGTAAACAC CACACTTCTG CCGTAACAAG AGATATCTGG
GTGTTTGATG TAGCTGCGAA AACCTATAAA CAGGTGTCCG GCTATGAAGG AGAAGACCGC
GAACCACTGT TCGCCGGCGA CAATGATATC TACTACCTGA GTGAAAAAGG TGGGATCGCC
CAGAACCTCT TCAAAGCATC TGCTATAGAT AAAAACAAGA TGCAACAGCT GACGAAATTC
GAAAAACATC CGGTACGTCA CCTGTCTAAA TCTGATGATA ACCTGCTCTG CTTCACCTGG
AACGGTGAAA TCTATACCCT CAAAGAAGGA CAGCAGCCAA AGAAACTTGC TGTACAGATC
TTCAATGACG GCCGTTCTTC CGTTACCAAA CCGATTCCCA TCAGTGGTAA CGTGACCCAG
TTTGCTATGC GTCCTGACGG AAAGGAAATG GCATTCGTGG CCCGTGGGGA GGTTTTTGTG
ACCAGCGTAG AAGGTAATAT GACCAAACGT ATCACAAACA CGCCGCAACA GGAACGTTCT
GTTGCCTGGT CGCCTGATGG AAAGAAACTG GTGTATGCCG CCGAAAGGAA CGGTAACTGG
GACGTGTATC AGACAACCAT CGTACGTGCA GAAGAGCCTT ATTTCTTTGC AGCTACCCTG
CTGAAAGAAG AACCGCTGAT CGCTACGGAT GCAGAAGAAT TCCAGCCGGT ATTCTCTCCT
GACGGAAAAG AGATCGCTTT TGTAGAAGAC CGTAACGTAC TCCGCGTATA TAATATCGCT
TCAAAGAAAA GCCGTACCCT CTTACCTGCC GGCCGCAACT TCTCCTATTC TGACGGTGAC
TGGGAATTTG CCTGGAGTCC CGACAGCAAA TGGATCGTAA CAGATGACCA CCAGGGTTAT
TTCAATGTCA CCAATGCAGG GATTATTCCT GCGGATGGTA AAGGACAGAC AATCTATCCG
GTAATGAGTG GTTTTGGCGA AGGCAACACC AAATGGGCGT CAGATGGTAA AATCATGACC
TGGCTGAGCG ACCGTGATGG TCGTCGCGGA CTGGCACGCC AGGGAAGCAC AGAAGTAGAC
ATCTTCGGCG TGTTCTTCGA CCAGGAAGCT TATGACAGAT TTAAGCTGTC CAAAGACGAT
TTTAACCTCC TGAAAGAGAA AGAAGATAAC GCTAAGAAAA AGGATACGGT AGCGGCTAAA
AAAGACAGCG CAGCGCCTAA AAAGCCTTTT AATCCTGATT TCAATAACCT GGATAGCAGG
ATTGTAAGAT TTACGGTTAA CAGCGCCTCT ATCGGTGATT ATGTGCTGAA CAGCGATGCC
AGCAAGATCT TCTATATGGC CGCCTTTGAA AAAGGCTATG ATCTCTGGAC AACCGAACCG
AGAACCGGAG AAACCAAAAT ACTGGCTAAA CTCGGTGGTA GTCCGGGTAG TATCGCCCTG
AGCAAAGACG GTAATACCGT GTTTGTCAGC AACCGTGGCA GCGTGGTAAA AGTAGACGCC
TCTTCCGGCA AAATAACACC TGTATCCATC AATACGGAGT TTGTACTCGA TCAGGAAGCG
GAGCGCCGTT ATATCTACGA ACACGCCTGG AAACAGGTAG TAGACAAGTT CTATGATCCG
GCGACACTGA AGAAGATAGA CTGGGAAATG TATGCCAAGA ACTATGAGCG TTTTCTGCCT
TACATCAGCA ACAACTACGA TTACCAGGAA CTGCTGAGTG AATTACTGGG AGAACTGAAT
GCTTCTCATA CAGGTGGCCG TTATTATGGC GGACGCGCTG ATGGTGATAA CACTGCTGCA
CTGGGATTAT TGTATGATGA AACCTATACA GGCAACGGAC TGAAAGTAGA TGAAGTGATC
AGCGGCGGAC CGTTTGACAA GGCTTTCAGC AAACTGAAGA AAGGCAATAT CATCGAGCGT
ATTGACGGAG AAGAAGTTTC CGCTAAACAG GATTGGGCCT TATTCCTGAA CCGTAAGACG
GGTAATAACG TATTGGTAAG CATCTACGAT CCTGCTGCTA ACAAACACTG GGACGAGTCT
GTAAGACCCA TCTCCAACGG TGAAGAAGGT AACCTGATGT ACAAACGTTG GGTAAACACC
ATGCGGACGA TGGTAGATAA ACTCAGTGGC GGTAAAGTAG GTTATGTACA CGTACAGGGT
ATGAACGACG CGAGCTTCCG TTCTGTATAC GACGAAGTAA TGGGTAAGAA CAGGGAGAAA
AAAGCACTGA TCGTGGACAC CCGTTTCAAT GGTGGCGGAT GGTTGCATGA TGATCTGTAT
AACTTCCTGG ATGGTAAGAC CTATCTGAAC TTTGCACCAC AGGGTAACCG TACAAAATCC
TTCGAACCAC AGACCCGCTG GACAAGACCA AGCTGTGTAC TGATGGGAGA GGGTAACTAT
AGCGACGCGC ATATCTTCCC TTTCATTTAC AAACAGGACA ACCTGGGTAA ACTGGTCGGT
ATGCCGGTAG CAGGAACAGG TACTGCCGTA TGGTGGGAAA GACAGATTGA TCAGTCATTG
GTATTTGGTA TCCCGATGGT AGCAACCTTC GGTAAAACAG GCGATCATCC GCTGGAGAAT
ACACAGCTGG AACCGGATAT CCGTGTACCG CTGCGTTATG AAGATGCTTT CAGTGGAAAG
GATAACCAGC TGGAAGCAGC GGTGACCGAA ATGCTGAAAG AAATTAAGTA A
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| Protein sequence | MRKLLLALTM CCTAGFSQAQ DNAQWLRYPA ISPDGKTIAF GYKGDIYRVD VNGGVAVPVT
IHEAQDMMPV WSHDGKYLAF ASDRYGNFDV FVMPATGGTP VRLTYNSASD YPYDFSPDNK
QVLFGSSRNA PAASVRFSSG LFANLYTVPV TGGRSLLVSA AGAENAHYNS KGTQIIFQDR
KGYEDPWRKH HTSAVTRDIW VFDVAAKTYK QVSGYEGEDR EPLFAGDNDI YYLSEKGGIA
QNLFKASAID KNKMQQLTKF EKHPVRHLSK SDDNLLCFTW NGEIYTLKEG QQPKKLAVQI
FNDGRSSVTK PIPISGNVTQ FAMRPDGKEM AFVARGEVFV TSVEGNMTKR ITNTPQQERS
VAWSPDGKKL VYAAERNGNW DVYQTTIVRA EEPYFFAATL LKEEPLIATD AEEFQPVFSP
DGKEIAFVED RNVLRVYNIA SKKSRTLLPA GRNFSYSDGD WEFAWSPDSK WIVTDDHQGY
FNVTNAGIIP ADGKGQTIYP VMSGFGEGNT KWASDGKIMT WLSDRDGRRG LARQGSTEVD
IFGVFFDQEA YDRFKLSKDD FNLLKEKEDN AKKKDTVAAK KDSAAPKKPF NPDFNNLDSR
IVRFTVNSAS IGDYVLNSDA SKIFYMAAFE KGYDLWTTEP RTGETKILAK LGGSPGSIAL
SKDGNTVFVS NRGSVVKVDA SSGKITPVSI NTEFVLDQEA ERRYIYEHAW KQVVDKFYDP
ATLKKIDWEM YAKNYERFLP YISNNYDYQE LLSELLGELN ASHTGGRYYG GRADGDNTAA
LGLLYDETYT GNGLKVDEVI SGGPFDKAFS KLKKGNIIER IDGEEVSAKQ DWALFLNRKT
GNNVLVSIYD PAANKHWDES VRPISNGEEG NLMYKRWVNT MRTMVDKLSG GKVGYVHVQG
MNDASFRSVY DEVMGKNREK KALIVDTRFN GGGWLHDDLY NFLDGKTYLN FAPQGNRTKS
FEPQTRWTRP SCVLMGEGNY SDAHIFPFIY KQDNLGKLVG MPVAGTGTAV WWERQIDQSL
VFGIPMVATF GKTGDHPLEN TQLEPDIRVP LRYEDAFSGK DNQLEAAVTE MLKEIK
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