Gene Cpin_2510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2510 
Symbol 
ID8358668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3086695 
End bp3087852 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content42% 
IMG OID644964696 
Producthypothetical protein 
Protein accessionYP_003122199 
Protein GI256421546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA ATTTTAGTAA AGGAGTGTTT CTCCTGACAA GTGTTTTGTT TTTTACTGTA 
AGTGTAAAAG CGCAGACCAA CAAGCTTGAT AATACGGGGA ATGTTGGTAT TGGAACCACG
GCTCCTGTAG TGAAGCTGAG CGTGTATGGA GCCACCGAAG ATGAAGCTGC CATTTCTGTT
CAATCTGCGA CCAACAGCCG TTTTTATATA CAGCAAGGTG GCTCTGTATT GAAAATAGGA
GGGACGACGC CAGGCACAGG TATCATCAAT GTGTCAAATA CCGGTAAGGT TGGTATTGGC
ACTAATGCTC CCGCTTCCAT GTTGGATGTT GATGGCGATT TCAGATTGGG CGTTAGTACC
GGAGGTACTG CATATTCTAT TGGATTTACC CGTACGGTAG GAGCGCATCT TTATGGTACA
ACCGCTACAG GTTTGACTTT AGGTGGAGAT CTCACGGGTA CCGACGCTGT GATTTTACCG
AACGGTAATT TTGGAATTGG CACAACTAAT CCCTCTAATA AATTGGACGT TGCTAACGGT
TCAATCAATA TCGGAGCAGG TGCAAATATC GCATACAAAG CCGGTAGTTA CCTTTCTATG
GGTAACATGT TATATACTAA CACACCATAT ATATCCTTTA ATGCATTGTT GACTACTTCG
GATAATAAGA ACCTGTTTAC GCCTAATTAT AATGCAGGCG GCGGCTTAGT GATAAGAGGG
GAAGCAGGCG GCAGCGGATT ACATTTTTTA CAAAAAAACT ATAACAATGG TGCGGCGCCA
TATGATGTTA ATACATTTAC GGAAGCCCTT ACACTTACAT CTACAGGAAC AGTTGGTATT
GGTACTACCT CTACTGGCGT TCATAAACTG GCTGTAGAAG GGTCAATCGG CGCAAGAAAG
GTAAAAGTTA CTCTAACAGG ATGGGCGGAT TTTGTATTCG ATCCCAATTA CAAATTGCAG
CCATTGTCGG AACTTGAAAA TTATATCAAG ACTAACAGGC ATCTTCCTGA TGTTCCATCT
GCTACTGAAG TGGCAAAAGA AGGAGTGGAC CTTGGAGAGA TGAATAAGAT CCTCTTGCAG
AAGATCGAGG AACTTACACT GCATGTGATA GAGTTGGAAA AAAAGGTGAA AGATCTTAAG
GCAGAAAATA ATAAATAG
 
Protein sequence
MEKNFSKGVF LLTSVLFFTV SVKAQTNKLD NTGNVGIGTT APVVKLSVYG ATEDEAAISV 
QSATNSRFYI QQGGSVLKIG GTTPGTGIIN VSNTGKVGIG TNAPASMLDV DGDFRLGVST
GGTAYSIGFT RTVGAHLYGT TATGLTLGGD LTGTDAVILP NGNFGIGTTN PSNKLDVANG
SINIGAGANI AYKAGSYLSM GNMLYTNTPY ISFNALLTTS DNKNLFTPNY NAGGGLVIRG
EAGGSGLHFL QKNYNNGAAP YDVNTFTEAL TLTSTGTVGI GTTSTGVHKL AVEGSIGARK
VKVTLTGWAD FVFDPNYKLQ PLSELENYIK TNRHLPDVPS ATEVAKEGVD LGEMNKILLQ
KIEELTLHVI ELEKKVKDLK AENNK