Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2510 |
Symbol | |
ID | 8358668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3086695 |
End bp | 3087852 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644964696 |
Product | hypothetical protein |
Protein accession | YP_003122199 |
Protein GI | 256421546 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAAGA ATTTTAGTAA AGGAGTGTTT CTCCTGACAA GTGTTTTGTT TTTTACTGTA AGTGTAAAAG CGCAGACCAA CAAGCTTGAT AATACGGGGA ATGTTGGTAT TGGAACCACG GCTCCTGTAG TGAAGCTGAG CGTGTATGGA GCCACCGAAG ATGAAGCTGC CATTTCTGTT CAATCTGCGA CCAACAGCCG TTTTTATATA CAGCAAGGTG GCTCTGTATT GAAAATAGGA GGGACGACGC CAGGCACAGG TATCATCAAT GTGTCAAATA CCGGTAAGGT TGGTATTGGC ACTAATGCTC CCGCTTCCAT GTTGGATGTT GATGGCGATT TCAGATTGGG CGTTAGTACC GGAGGTACTG CATATTCTAT TGGATTTACC CGTACGGTAG GAGCGCATCT TTATGGTACA ACCGCTACAG GTTTGACTTT AGGTGGAGAT CTCACGGGTA CCGACGCTGT GATTTTACCG AACGGTAATT TTGGAATTGG CACAACTAAT CCCTCTAATA AATTGGACGT TGCTAACGGT TCAATCAATA TCGGAGCAGG TGCAAATATC GCATACAAAG CCGGTAGTTA CCTTTCTATG GGTAACATGT TATATACTAA CACACCATAT ATATCCTTTA ATGCATTGTT GACTACTTCG GATAATAAGA ACCTGTTTAC GCCTAATTAT AATGCAGGCG GCGGCTTAGT GATAAGAGGG GAAGCAGGCG GCAGCGGATT ACATTTTTTA CAAAAAAACT ATAACAATGG TGCGGCGCCA TATGATGTTA ATACATTTAC GGAAGCCCTT ACACTTACAT CTACAGGAAC AGTTGGTATT GGTACTACCT CTACTGGCGT TCATAAACTG GCTGTAGAAG GGTCAATCGG CGCAAGAAAG GTAAAAGTTA CTCTAACAGG ATGGGCGGAT TTTGTATTCG ATCCCAATTA CAAATTGCAG CCATTGTCGG AACTTGAAAA TTATATCAAG ACTAACAGGC ATCTTCCTGA TGTTCCATCT GCTACTGAAG TGGCAAAAGA AGGAGTGGAC CTTGGAGAGA TGAATAAGAT CCTCTTGCAG AAGATCGAGG AACTTACACT GCATGTGATA GAGTTGGAAA AAAAGGTGAA AGATCTTAAG GCAGAAAATA ATAAATAG
|
Protein sequence | MEKNFSKGVF LLTSVLFFTV SVKAQTNKLD NTGNVGIGTT APVVKLSVYG ATEDEAAISV QSATNSRFYI QQGGSVLKIG GTTPGTGIIN VSNTGKVGIG TNAPASMLDV DGDFRLGVST GGTAYSIGFT RTVGAHLYGT TATGLTLGGD LTGTDAVILP NGNFGIGTTN PSNKLDVANG SINIGAGANI AYKAGSYLSM GNMLYTNTPY ISFNALLTTS DNKNLFTPNY NAGGGLVIRG EAGGSGLHFL QKNYNNGAAP YDVNTFTEAL TLTSTGTVGI GTTSTGVHKL AVEGSIGARK VKVTLTGWAD FVFDPNYKLQ PLSELENYIK TNRHLPDVPS ATEVAKEGVD LGEMNKILLQ KIEELTLHVI ELEKKVKDLK AENNK
|
| |