Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2436 |
Symbol | |
ID | 8358591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2998361 |
End bp | 2999374 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644964622 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_003122128 |
Protein GI | 256421475 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.862248 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACCAAT ACCACCTCTA CACCATACGC GACTTTGCCC TGGATGAATA CTTCCAGGAG TGGGTCCTGC GTCCGGATGT CAAAAATACC TGGTACTGGG ACAACTGGCA GAAGGAACAC CCGGAGAAAA AAGAGGTTAT CGCCGCTGCT ATCAGACTGG TAAAATCCAT CCAATTCCGC GAATATGCCA TGCCGCCAGC TGAAAAAGAA GTCCTCTGGG ATAACATCTG GGACAGCATT GCCACAGAAA GTGAGCATGA AACAGTCATA CCTGCAGCCA CCCACCGGCA TTTCCCCTGG AAATATGCCG CTGCTGTCGT TATCCTGCTT GTAGCAGGTA CATTGTGGTT CATGCGGAAA CAAGCCACCT TTACACCTGT AACTGCCAGT ATGGCCACAC AGACAGGACA AACAAAACAC TTCCTGTTGC CTGACAGCTC GGAAGTATGG CTCAATGCTT CCTCGAAAAT ACAGTATACA CAAAAGGATC TAAACGCACG TGAGGTATGG CTGGATGGAG AAGCCTGGTT TCATGTAAAA CATACTGCCG CCAACAGTCG TTTTATCGTG CATACCTACG ACAAACTTTC TGTGGAAGTA CTCGGTACAC AATTCAATGT CAATAACGCC GGGGATAAGA TAGCTGTTGC ATTGCAGGAA GGAAGCATTA AACTGAACAT CACAGAACAA CAGGGACAGA CGCCTACACA GTTATATCTG CGACCGGGAG AGGCATTACG TTATAATAAG ACAGACGGCG CTTATACAAA GAGTAAAACA GATGCGGATA AAGCAGGCGC ATGGACCCGA GGACAACTGA TCATGGAAGA CTACACCGTA GCAGACGCCA TACAGTTTAT GCAACAGGTA TTTGACAGAC ATGTAACAGT CAAAGACAAA AAGACCCTGC GATACGGTAT TTCAGGATCG ATGCCCATTA GTTATAACGC AGACACAATG CTTATACAAT TTGAAAAGGC TTTTAATACA CGCTTTTTCA GACAGGATAA ATAA
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Protein sequence | MNQYHLYTIR DFALDEYFQE WVLRPDVKNT WYWDNWQKEH PEKKEVIAAA IRLVKSIQFR EYAMPPAEKE VLWDNIWDSI ATESEHETVI PAATHRHFPW KYAAAVVILL VAGTLWFMRK QATFTPVTAS MATQTGQTKH FLLPDSSEVW LNASSKIQYT QKDLNAREVW LDGEAWFHVK HTAANSRFIV HTYDKLSVEV LGTQFNVNNA GDKIAVALQE GSIKLNITEQ QGQTPTQLYL RPGEALRYNK TDGAYTKSKT DADKAGAWTR GQLIMEDYTV ADAIQFMQQV FDRHVTVKDK KTLRYGISGS MPISYNADTM LIQFEKAFNT RFFRQDK
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