Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2324 |
Symbol | |
ID | 8358479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2862542 |
End bp | 2863435 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644964510 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_003122016 |
Protein GI | 256421363 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.888846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.780097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTAT TAATCACAGG AAGCAACGGA TTATTGGGCC AGCACCTTAT TCCCGTTTTT TTGGAGGATA GCCGGTATCA GGTAATAGCC AGCGGAAGAG GACCTAACCG TCTGCCGCAA CAAACCGGAT ATATCTATGA AGCCACTAAC CTGCGGGATG CCACCAGCGT GAAGCACCTG CTGGATAAAT ATCAGCCGGA CATCGTCATT CATGCTGCCG CTATGACCCA GGTGGATGAC TGCGAACGTA ACAAGGATCT CTGCTGGGAT ACCAACGTAG CTGCTACCCG TTACCTGCTG AAGGCCGCCG AAGCACATAA CACCTTCTTC ATTTTCCTGT CTACCGATTT TGTATTCGAC GGTTTAAAGG GACCCTATGC AGAAGAGGAT GCGGTAAACC CCATCAGTTA TTATGGCTCC AGCAAAGTGG CGGCTGAAAA CATGGTACGC GGCAGTAAAC TGCCCTGGGC CATCGTACGT ACCGTACTGG TATATGGTAT CGCAGCCGAC TCCAAACGCA GTAACATCAT CACCTGGGTG AAAAACAACC TGGAACAGGG CAAAAAGCTG AAGGTCGTGG ATGACCAGTG GCGAACCCCA ACCCTCGTAC AGGATCTGGC AGTCGGATGT AAGCTGGTAG CGGACAAAAA AGCTGCCGGA ACATTCCACA TCTCAGGTAG CGAAACGCTG ACCCCTTATC AGATGGCGGT ACAGACTGCC GATTATTTCA AACTGAACAC ACAATTGCTT GAAAAGGTAG ATGCCAAAAG CTTCACGCAA CCTGCCAAAC GCCCTGCTAA AACAGGTTTT GTAATAGATA AAGCCGTGAA AGAGCTGGGT TTTGCTCCGC ATAGTTTTGA TGAAGGACTG GAGATCTTGT CAAAAGAGAT CTAG
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Protein sequence | MKVLITGSNG LLGQHLIPVF LEDSRYQVIA SGRGPNRLPQ QTGYIYEATN LRDATSVKHL LDKYQPDIVI HAAAMTQVDD CERNKDLCWD TNVAATRYLL KAAEAHNTFF IFLSTDFVFD GLKGPYAEED AVNPISYYGS SKVAAENMVR GSKLPWAIVR TVLVYGIAAD SKRSNIITWV KNNLEQGKKL KVVDDQWRTP TLVQDLAVGC KLVADKKAAG TFHISGSETL TPYQMAVQTA DYFKLNTQLL EKVDAKSFTQ PAKRPAKTGF VIDKAVKELG FAPHSFDEGL EILSKEI
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