Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2277 |
Symbol | |
ID | 8358432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2807467 |
End bp | 2808705 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644964463 |
Product | glycosyl transferase group 1 |
Protein accession | YP_003121969 |
Protein GI | 256421316 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAC GTTTATTACT GATAGGCGGC AACTTTGCCC CTGAACTGAC GGGTGTAGGA AAATACAATG GAGAGATGAT CGGATGGCTG GCAAACAATG GTTACGATTG TACGGTCATC ACGTCTTTTC CGCATTATCC ACAATGGAAA ATACAGGCGC CCTATACTAA AAGCAGGTAT TGGTATAAAA AAGAAACGGG ATATTATGGT CATGTGAAGG TCTACAGATG TCCGCAGTAT ATTCCCGCAC GGCCATCTGG TGGCAGACGA CTACTAATGG ACTTTAGTTT TGCGCTCAGC GCATCTTTTC AACTGTTACT GGAGTTATTC AGAAAGAAAG CCGACTTCGT AATGGTAGTG GCGCCTCCAT TTCATCTGGG ATTACTGGGT GTGTTATACA GCAAACTCAG AAAAGCGACT TTCATTTATC ACGTACAGGA CTTACAGATA GAGGCCGCCC GGGATCTGCA TATGATATCT TCCCCTGCCC TGATAAAGCT GCTTTTTGGT ATCGAAAGAT TTATCCTAGG CAGGGCTGAC ATTATCAGCA GTATTTCTGA GGGGATGATC CAGAAAATCA GGGAGAAATG CGGGCATACT ATTACCAGTT TTCCGAACTG GGTAGACGTA CGCCTATTTC ATCCGCTGGA ACATAAACAG GAAATCAAAA CGGCGTATGG CTTCGCAAGC AGCGATACTG TCATACTATA TGCAGGTGCG ATCGGAGAGA AACAGGGGCT AGAGGCTATT CTACATGTAG CGCAACAGGT CAGGCACCAG TCACACATCA AATTTCTGAT CTGCGGTGCA GGTCCGTACA GGGAAAAGTT GCACCAGCAG GTACATGCAC AGGGCTTGCG TAATATTCAA TTCAGGGATC CGGAACCATT TGACAACTTC AACCGCTTGC TGAATATGGC GGATGTACAT CTGGTCATCC AGAAAGCAAG TGCGGGAGAC CTGGTGATGC CGTCCAAACT GACCACGATC CTTGCGGTGG GTGGCGTGGC GGTAGTTACT GCAAATGAAC ACACTAGTCT TTATAAAGTA GTAACGGAAA ATGAAATAGG GATTGTCGTG CCGGCAGATG ATGCCGGTGC ATTGGCAAGC GGCATTTTAC AGGCTGTCAC TAAAAGCCAA GAGCACATCA CCGGAAATGC CCGGAGATAT GCTCTTGAAT ATCTTTCTAT TGACAAAATA ATGTCGAGGA TGGAGGATAC CATCAGGGCA TCCACATAA
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Protein sequence | MSKRLLLIGG NFAPELTGVG KYNGEMIGWL ANNGYDCTVI TSFPHYPQWK IQAPYTKSRY WYKKETGYYG HVKVYRCPQY IPARPSGGRR LLMDFSFALS ASFQLLLELF RKKADFVMVV APPFHLGLLG VLYSKLRKAT FIYHVQDLQI EAARDLHMIS SPALIKLLFG IERFILGRAD IISSISEGMI QKIREKCGHT ITSFPNWVDV RLFHPLEHKQ EIKTAYGFAS SDTVILYAGA IGEKQGLEAI LHVAQQVRHQ SHIKFLICGA GPYREKLHQQ VHAQGLRNIQ FRDPEPFDNF NRLLNMADVH LVIQKASAGD LVMPSKLTTI LAVGGVAVVT ANEHTSLYKV VTENEIGIVV PADDAGALAS GILQAVTKSQ EHITGNARRY ALEYLSIDKI MSRMEDTIRA ST
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