Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2176 |
Symbol | |
ID | 8358328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2668625 |
End bp | 2670091 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964360 |
Product | cytoplasmic alpha-amylase |
Protein accession | YP_003121869 |
Protein GI | 256421216 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCAGT ACTTCCACTG GTATACGCCA GAGGATGGAA GTTTATGGAA TACGGTGAAA AAAGAAGCCC CAAAACTGGC CGCCCTGGGT ATTAACGCCA TCTGGCTGCC GCCTGCCTAT AAAGGAGCGG ACGGCGCCAG CAGCCGTGGA TATGACGTGT ATGATCTGTA TGACCTCGGT GAGTTTGATC AGAAAGGGAC GGTTCGTACC CGTTACGGTA CCCGCGAGGA GTTTGAAGCA GCTGTTAAAG CTATTCAGGA GAGCGGTATG CAGGTCTATG TGGATGTTGT GGCAAATCAC CTGATGGGTG GAGACGAAAC GGAAAAGGTG ACGGTACGTA AAGTAGATGC GGAAAACAGG AACGAGTTTA TTTCTGAGCC GATGGAAGTC GAGGCTTATA CCCGTTTTAC TTATCCGGGC CGTAAAGGTG CGCATTCTGA TTTTGTATGG GATCACCAGT GTTTTACCGG TATCGATCAT GTCAGCAATA GTGATGAAGA GGGCATTTTC ACCATTCAGA ATGAATATGG CGAAGGATGG GAGGAAGTGA TAGACACGGA AAAGGGAAAC TATGACTACC TGATGGGCGC CGATATAGAA TTCCGTAATC CTGCTGTCAG AGAAGAATTC AGAAGATGGG GAGAATGGTA TTACAATGCG GTGAAATTTG ATGGTTTCCG TCTGGATGCG GTGAAACATA TTACGCCTTC TTTCTTCAAC GAGTGGCTGG ACCAGATGCG TCAGTATACC GGCAGAGAAT TGTTTGCAGT AGGAGAATAC TGGGCGCCAG GTCAGCTGGA CCTGTTATTA AAGTATATAG AAGCCACAGA GGGCAAAATG TCTTTATTCG ATGCCTCTCT GCATCATAAT TTCTATGATG CTTCCCTGAA AGGAAAAGAC TATGATCTGA CAACCATCTT TGATGGTTCG CTGGTACAGG CGAAGCCTTT CCTGGCAGTG ACGGTGATTG GTAATCATGA TACCCAGCCA TTGCAGGCAC TGGAAGCACC GGTGGATTAC TGGTTCAAAC CGATTGCTTA TGCACTGATC CTGTTGCGTG AGCATGGTTA TCCTTGTGTC TTTTATCCTG ACCTGTATGG TGCAAAGTAT ACGGATAAGA ATGGGGAAGG GGAGGATACG GAAATAGAAC TGGTACCGGT AGAAGGACTG GAATTATTGA TTCCGGCGAG GGACCAGCAC GCCTATGGTG TACAGCGTGA TTATTTCGAT CATGCGAACT GTATCGGCTG GACACGTGAA GGAGATGAAG AGCATACCGG TTGTGCAGTG GTCATTTCTA ATGGAGAAGA AGGGAATAAG CACATGGAGA TCGGAAAGCG TTATGCCGGA AAGCGGTTTA AAGATATACT TGGCAAACGG CAGGAGGAGA TTGTGGTGGA TGAAGAAGGA TGGGCTGAGT TCCTTTGTGC GGCAGGTTCG GTATCTGTGT GGACATTAGC TGAATAA
|
Protein sequence | MMQYFHWYTP EDGSLWNTVK KEAPKLAALG INAIWLPPAY KGADGASSRG YDVYDLYDLG EFDQKGTVRT RYGTREEFEA AVKAIQESGM QVYVDVVANH LMGGDETEKV TVRKVDAENR NEFISEPMEV EAYTRFTYPG RKGAHSDFVW DHQCFTGIDH VSNSDEEGIF TIQNEYGEGW EEVIDTEKGN YDYLMGADIE FRNPAVREEF RRWGEWYYNA VKFDGFRLDA VKHITPSFFN EWLDQMRQYT GRELFAVGEY WAPGQLDLLL KYIEATEGKM SLFDASLHHN FYDASLKGKD YDLTTIFDGS LVQAKPFLAV TVIGNHDTQP LQALEAPVDY WFKPIAYALI LLREHGYPCV FYPDLYGAKY TDKNGEGEDT EIELVPVEGL ELLIPARDQH AYGVQRDYFD HANCIGWTRE GDEEHTGCAV VISNGEEGNK HMEIGKRYAG KRFKDILGKR QEEIVVDEEG WAEFLCAAGS VSVWTLAE
|
| |