Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2143 |
Symbol | |
ID | 8358295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2624448 |
End bp | 2625284 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644964327 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003121836 |
Protein GI | 256421183 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATATCA GGAACCTCAC CCAGCAATTG GAGATCGACT ATGTGGTCAA GGATATCTGG CCTTTTCTAT TGCATAAGCA TACACATTTT GAAATGCTGT ATATCATGCG GGGGAGAGGA CAGCATATGA TCAACGGAAC GACCTATAAC TATGAAAAGG GCGATCTGTT TATACTGGTC CCACAGGATA ATCATTTCTT TGTTTTTCAG GAACGCAGCG CTATTTGTAT CATGAAATTT CATGAAGGGT ATTTCAGCGA TTTTCTGCAG GATGCGAAGT TTAAAGATCT GTTTACCGCA TTGTCTTCTC CATACCGCAA GGTCTCTGCC GGCTGTAAAA ACAAACAGGA TATCATGCAG CTGATGGAGC TGATCATACG GGAGCACCGG AAGGAAAGCG CCCATCAGCA GATCATTATA AAACATGCTC TTTCTCTGAT CATTACACTG ACTGCAAAAG ATGCCGGTGA ACAATTATCG ACTGCCAAAG ACGATAAAAT ACAGTCTGTG CTGAACTACA TCCACCAGCA TATCGCAGAT AAACACCTAT TGTCTGTACA AAAGATGGCA GATACTTTTC ATATCAGTAA GAGTTACTTT AACCAGTATT TCAAGAATGC TACCGGTAGC GCTTACAAAA AGTATGTACA GGAATATGCC CTTAAACTGA TCGCCAGTCA GCTGGTAGGC AGAAATAAGA CACTGACCCA GTTAGCCGAG GAATTTGGAT ATAGTGATGA AAGCCACCTG AACCGTGCAT TTAAGGCGCA TTTCAACCTT AGTCCTTCTG CCTTTAAGAA ACAGCAGATG CGCCGATCTA TAGTTTATAC AGGATAA
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Protein sequence | MYIRNLTQQL EIDYVVKDIW PFLLHKHTHF EMLYIMRGRG QHMINGTTYN YEKGDLFILV PQDNHFFVFQ ERSAICIMKF HEGYFSDFLQ DAKFKDLFTA LSSPYRKVSA GCKNKQDIMQ LMELIIREHR KESAHQQIII KHALSLIITL TAKDAGEQLS TAKDDKIQSV LNYIHQHIAD KHLLSVQKMA DTFHISKSYF NQYFKNATGS AYKKYVQEYA LKLIASQLVG RNKTLTQLAE EFGYSDESHL NRAFKAHFNL SPSAFKKQQM RRSIVYTG
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