| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2076 |
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| Symbol | |
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| ID | 8358228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2534434 |
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| End bp | 2539656 |
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| Gene Length | 5223 bp |
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| Protein Length | 1740 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644964261 |
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| Product | YD repeat protein |
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| Protein accession | YP_003121770 |
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| Protein GI | 256421117 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATTA TAAATAAAGT AGTCTTATTC CTTATACCTT TTCTCTGCAG CTATTTATCT
AGAGCTAAAG CGCAGACGAT AAGTGTTGAT CCTGGTACAA TTGCTCCAGA GAAATATGTT
TTTGTAAAAG GAGATATCAT TTATATTAAA AATACCAGGT CTCCCGTAAG TATACAGACT
CCGATGCCTG TTCAGATATG GGAAAAATCG ACTGATGGAA TGAACTGGGT GGCTATTAAT
AATGGAAGGG GGAGTAATGA ATTACATGAA ATAGCAACCA CCACGGGAAC TATTTATTAC
AGACGAAAGT TTTCATTGAA TTCTAACGAA GCTATCATAT CTGTTCAGGA AAAGTTAACA
GGAGGTGAGA TATCCGGAGC GCAATACATT GCTCCAGGTG TTACCCCATC AGTATTAGGT
AATGTGGCTG GCGCTACTGG AGGTGCAGGT GCTTATTCTT ATCAATGGGA ATATTCTGAT
GACGAAACTA ACTGGACATT GATTAGCGGC GCTACAGCCC AGACTTATCA ACCAGCAGCA
GTGACTGCTA CAAAGTATTT CCATCGGAAG GTAAGTTCTG GAGGTCAGGA GAGTTTCTCT
AATTCAATAC AACTCTTTCT TAATAATAAT GTTACGCAGA ATGCGCCGGC AGCTACGACG
GTTAACACTA CTGTGCCGGT TGTGGGCTTT CCTGGATATA GTGGACTTGT GACGGCTAAT
CTGCGCAAAA GAACGACTGT GGATATTCTC AAACCCAATG TGGTAAACTG GGAGAATCCT
GGTACGCCAT TGTCTGATGC GGATTATAGA AAACAGATTA CTTATCAGGA TGGTATTTCC
CGTCCCATAC AAAGTGTTTA CTATAAGCGT AGTAGAAGCG GAAAAGATAT CGTGTCGCAA
TCTGTCTATG ATAAATTTGG TGTTGAAAAG ATAACGCCTT TGCCTTATGT AGCTGCTACT
GACGCCAATA ATGCAGGTCA GTTCCGTGTA GACGCTGGAA CAGCACAACA AGCCTACTAT
AATACACTCA CTGCGGGTAA AGAAAGCCAC TTTTATTCCA CATATTCGGA AGAAAATTCA
ATAGCTCCGA GGAATAGTAT AGGGAGTGGT CCGGGTAAGA GGGCGGCTGG AATAAATAAG
GGGGCGAGGT CTGAATTGAG AGTGAATACG GTAGCTGACA AAGTAAGAAT ATGGGTAATA
GGTGATAATG ATAATGATAT ACCTTCCAGT AGTGCATTAT ATGAGCCTGG TGCGCTTACT
GTAAGCATTT ATACAAATGA CGAAGGTAAT AAGATCTATA CCTATACAGA TAAAGAAGGC
CGTACAGTGC TTGAATCTGA CCAAAGAAAT GGTGCAGATA ATCCTGGTGA CGGTGCAAGA
ACCTACTATA TATATGATGC TATAGGTAAT CTTCGTTATA TTCTTCCTCC TTTGGCGACA
GCTTATTGTG TGGCTAATAA CAACTGGAAC TTTTCAGGAG CAACTTCAAT ATTAGAGCAA
CTATCTACCA GATATCTATA CGATGTAAAA GGGCGTATAA TCAGTTCTCA AAAGCCAGGA
ACGGACGGGC CGACATATAT GGTATATGAT AACAGGGACC GACTGATCTT CGCACAAGAT
GCCAAATTGC GCTCCAATAA TAAAGGAGAA TGGATATTGT TTTTTTACGA CCATATCGAT
CGTCAGGTAA TGCGGGCAGT ATATAAGAAC GCCAGTGCTA CGAGACCAAG TCTTCAGACT
CAGATAGATG CAGCTGCTGC ATCTGCGAGA ACGACGTCTA TTACCATACC AGCAATCTCT
GATTTGTACA TTGATAAACG TGAAGAAGGA GTATCATCCT ACATTGCAAA AAACTCGATA
GTATTTATTG ACGGATTTGA AACAAACGTA AATGACGAGA TTGCAGCTGA TATAAATCCC
AATGCTCCGG GGACTGTGGA GTCCAGACCC TTAAGTATCA TCCCTGGTTT TGACTATGGT
AACTATGAGC CACTGGTAAC AGCCTACTAT GATAACTATA ATTGGTCAGG GGCTGCGAAA
TTTAGTGATG ACTTTCAGGT AAGCGCGGGA AATAACAAAT ATCCGCTGAA TGTAGAACCT
GACTATGAAG TTAAAGGGAT TCCGACCGGT TATAAAGTAA AAGTATTAGG CACAGATCAA
TGGTTATCAA CAACATTTTT TTATGACCGT TATGGAAACG CTATTCAGTG TCAGTCTGAT
AATATAAGCG GGGGTAAAGA TATTGTCACT TTCCAATATG ACTTTGCTGG CAATGTCCTT
TCTGTCTATA GTATAGTTAA AAATCCTAAA GCTGTTACAC TGAACGAAGT GAGAACACGT
GTCCGCAATG AATATGAGAA TGGTAGAATA ATGAAGGTCT ATCATGAAAT TGTGAACGGG
CAAGCGGTTT CAAAGTTAGT GGGTGAGTAT GATTATGATG AATGGGGGCG CATTACCCAG
AATAAGCTGG GAACACTTGA AACATTACAG TACGATTATG ATTTTCAGGG AAGGATAACT
GGTATGAATG CGGCATATGC GAAAGATAAG TCAGCTGGCA ACTACTTTGG TATGCAGTTC
TTTTATGATG ATGGCTTCCA GAATGGAAGA ACAGACGATA AGTTGTCTGG TGTAACATGG
CGCAGAAAAG GCGATCCCGA TGAATGGCAT GCGTATGGCT TCGGATACAA CAGTGGAGGA
GGGCTTGCAA AAGCTGACTA TACACAAAAT ACAGGTAGCA ACTGGAATAA TACCGATGTG
GATTATAAAG TATACGATCT GGAGTATGAT GCAAACGGAA ATATCAAAAA ATTGAAACAG
GATGGGATGT TACTGGGAAA GGTGAAATCA GGTATAGATG ACCTACAGTA TACATATGAT
AATAATAACT GGAGTAATAC GCTTGTAGCT GTGGAAGATA GCAAAGGAAA CAAGCAGCAA
GGTGATTTTA AAGATGGGGT ACATACAGCT GTAGAATACA ATTATGATGA AAATGGTAAT
CTTATTAACG ATTTGAATAA GGGGATTACC ATTGTATATA ACTCATGGTT GAATAAACCA
GAAAAGATAA CCTTTGACAA TGATGCCACT AAAAGTATAA GTTTTGTATA TAATGCTCAG
GGACAGCGAT TACAAAGGAT TGTAAAAGAT GGTACAAATA CCTATACGTA TACTTATAAC
AGTGGATATA TCTACAAGAA TGATAAGTTA CTTTTATTTC CCCAACCGCA AGGGCGGGTC
CGTGTGAATG CTAACGGGCA AATGATATAT GATTATTTTA TTTCCGATAA TAGAGGGAAT
ACCCGTACTG TAATTACAGA GGAAACGAAT GAGGTATACT ATAAAGCATC ACATGAAACT
AATCCTCAGC CAACGCCTGC TATTCCGGAA AGGGAAAGTT TTAATTTCCC AAAATATGTA
GATGTAATCC CTGCGGGGCA TAAGTTTTAT GATTATCAGG GAACTGGTAG CAACAGGCAG
TTTGTTAAAT TGAACAGTGG TGATCCTGAT AGAAAAATTG GCACAGCGAA AGTCCTTAGG
GTGATGGCAG GTGATAAAGT AGAAGTAGGA GTACAGTCTT ATTATGCTAA CAATTCGGTA
TCAAACAATA CACCTAATGA ACTGCCGGAG ATAATTCTGA ATCAGCTTAT CAATTCTTTA
CTAGGCCCTG TTGCCGTAAT TCCGAACGGA CATGATAATA TTCTTCAGGG AACGGGGAAT
GGACTTATTC TCAATAAAGA GGATATGAAC ACATTCTTAC AGAATAAGAA CAACGCCAAT
CCTCCATCGC AGGTTCCCAA GGCATATCTT AACTATGTAT TGTTTGACGA TAATTTTAAA
ATGATTGAAG GCAACCCAGT AAGGGTCTCA TCTCCAGGGG AAATTATCCC ATTGACCGGG
CAATTAGATG TCAGGAAAAA TGGTTATCTG TACGTTTATT TGTCAAATGA AAGCAACGCT
GATGTTTATT TTGACGATCT GGTTGTCAAA CATACGAGTG GTCATTTGCT TCAGGAGGAC
TCATACTATC CCTTTGGATT GCAGATGAGA GGGTTAAGTA GCCAAGCATT AAGCCGATTG
GAGAATAATT ATCTTTACAA CGGTATTGAG AAAATATCGG ATTTTGATCT CGAGATTTAT
GATGCTGCTT ACCGCAATCT TGATCCGCAG ACAGGTAGAT GGTGGCAGCA AGATCCTCTA
CAGGAAACTA TGGTTAATTA TTCGCCATAT AACAGTAATT TCAACGATCC TATCAATTTT
TCAGATCCTA ATGGAGACTC ACCGCTTGGA GTGTTCCTGG GCGCTACTGC GGGATTTGCT
GTTGGAGCTA CTGCCGGTTA CATGATTGCA AACAATAATG GTTATGACAA GAAGACGACA
ACACTTACAG GCGCAATTAT AGGAGGTGTT TTAGGAGGGG TTGCAGGAAA TTACGGAGGC
GCAATCTTTA ATAATGATAA CAACGTATTA AAATGTTTTA ACTTCCAAAA AAAATGGATT
GATGATCCTA GTTTCTTCCA AAGAATCGGT TACTATTTTC AACGGAGCGA AATAGGAACG
GAGAAAACAA TTATGTTCAG ATTCAAAGCG GAGTATATAC GTAAAATTAA ACCTGACAAA
CTTAAAATAG TCATAAATAA AGGACTTATA AACATACCTG TATTACCAGT TAGACCAATA
TTTCAGGATA TACCAGACAA GGATCCTGTT GACGAAGAGA AGGGGGATGG TAAAAAGAAG
GAGGAGGAAA AACCCGGGGG TGGGGGAGGA CCGCCGAAAG AGAAAGAAGT GATAAAAAGA
ACATTCAGAT CAGCTGCGCC GACTCAGGAT CCATGGATTA CTTTGTCAAA GGAACAGGTA
GATATGATGA ATCAGATAAT CAAACTTGCA AAAGAGGCAG GAAAGACCAA GGTTATACTA
CTTTACAGGT CAACATCTTC TGAGGCATTT TTCCAGCTGA GTAAAAATTA TCGCCGGGAT
GCGAATATGT ACGAAACATT TGATCCTAAA ACGGGATTAA GAATTGAGGA TATCGGTGGG
CATAAGGGAA AGACTGACCA ACGGAAAATG ATTCTCGATC AGCAATTTGG AACTAATGGC
TGGAATAATC TGATGGAACA AAGGGTAAAA ATGCTAGACT ATATGAAGAA TAAAGGAATG
AAACCAACTG TTGAATTTAA AGCAAGCTCG AACTTTAACG GGTATGATGT GGAAATCCAA
TAA
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| Protein sequence | MRIINKVVLF LIPFLCSYLS RAKAQTISVD PGTIAPEKYV FVKGDIIYIK NTRSPVSIQT
PMPVQIWEKS TDGMNWVAIN NGRGSNELHE IATTTGTIYY RRKFSLNSNE AIISVQEKLT
GGEISGAQYI APGVTPSVLG NVAGATGGAG AYSYQWEYSD DETNWTLISG ATAQTYQPAA
VTATKYFHRK VSSGGQESFS NSIQLFLNNN VTQNAPAATT VNTTVPVVGF PGYSGLVTAN
LRKRTTVDIL KPNVVNWENP GTPLSDADYR KQITYQDGIS RPIQSVYYKR SRSGKDIVSQ
SVYDKFGVEK ITPLPYVAAT DANNAGQFRV DAGTAQQAYY NTLTAGKESH FYSTYSEENS
IAPRNSIGSG PGKRAAGINK GARSELRVNT VADKVRIWVI GDNDNDIPSS SALYEPGALT
VSIYTNDEGN KIYTYTDKEG RTVLESDQRN GADNPGDGAR TYYIYDAIGN LRYILPPLAT
AYCVANNNWN FSGATSILEQ LSTRYLYDVK GRIISSQKPG TDGPTYMVYD NRDRLIFAQD
AKLRSNNKGE WILFFYDHID RQVMRAVYKN ASATRPSLQT QIDAAAASAR TTSITIPAIS
DLYIDKREEG VSSYIAKNSI VFIDGFETNV NDEIAADINP NAPGTVESRP LSIIPGFDYG
NYEPLVTAYY DNYNWSGAAK FSDDFQVSAG NNKYPLNVEP DYEVKGIPTG YKVKVLGTDQ
WLSTTFFYDR YGNAIQCQSD NISGGKDIVT FQYDFAGNVL SVYSIVKNPK AVTLNEVRTR
VRNEYENGRI MKVYHEIVNG QAVSKLVGEY DYDEWGRITQ NKLGTLETLQ YDYDFQGRIT
GMNAAYAKDK SAGNYFGMQF FYDDGFQNGR TDDKLSGVTW RRKGDPDEWH AYGFGYNSGG
GLAKADYTQN TGSNWNNTDV DYKVYDLEYD ANGNIKKLKQ DGMLLGKVKS GIDDLQYTYD
NNNWSNTLVA VEDSKGNKQQ GDFKDGVHTA VEYNYDENGN LINDLNKGIT IVYNSWLNKP
EKITFDNDAT KSISFVYNAQ GQRLQRIVKD GTNTYTYTYN SGYIYKNDKL LLFPQPQGRV
RVNANGQMIY DYFISDNRGN TRTVITEETN EVYYKASHET NPQPTPAIPE RESFNFPKYV
DVIPAGHKFY DYQGTGSNRQ FVKLNSGDPD RKIGTAKVLR VMAGDKVEVG VQSYYANNSV
SNNTPNELPE IILNQLINSL LGPVAVIPNG HDNILQGTGN GLILNKEDMN TFLQNKNNAN
PPSQVPKAYL NYVLFDDNFK MIEGNPVRVS SPGEIIPLTG QLDVRKNGYL YVYLSNESNA
DVYFDDLVVK HTSGHLLQED SYYPFGLQMR GLSSQALSRL ENNYLYNGIE KISDFDLEIY
DAAYRNLDPQ TGRWWQQDPL QETMVNYSPY NSNFNDPINF SDPNGDSPLG VFLGATAGFA
VGATAGYMIA NNNGYDKKTT TLTGAIIGGV LGGVAGNYGG AIFNNDNNVL KCFNFQKKWI
DDPSFFQRIG YYFQRSEIGT EKTIMFRFKA EYIRKIKPDK LKIVINKGLI NIPVLPVRPI
FQDIPDKDPV DEEKGDGKKK EEEKPGGGGG PPKEKEVIKR TFRSAAPTQD PWITLSKEQV
DMMNQIIKLA KEAGKTKVIL LYRSTSSEAF FQLSKNYRRD ANMYETFDPK TGLRIEDIGG
HKGKTDQRKM ILDQQFGTNG WNNLMEQRVK MLDYMKNKGM KPTVEFKASS NFNGYDVEIQ
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