Gene Cpin_2067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2067 
Symbol 
ID8358219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2517520 
End bp2517945 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content45% 
IMG OID644964252 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003121761 
Protein GI256421108 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA TTGAACCACG GTCTGGGTGC CCGATTAGCT TCACGCTGGA TTTTCTAGGG 
GATAAATGGA CACTGTTGAT TCTGCGCGAT ATGGTAGTTG GTGGTAAAAG CAGCTATGGC
GATTTCCTGA GTTCCAATGA GAAGATTGCG ACCAATGTGT TGGCAGATAA GTTGAATAAG
CTGGAAGAGT ATGGGTTTGT AACAAAGAAG GTGTCGGCTG AAAAAAAGAA TAAGTTCCTG
TTCACGTTAA CTAAAAAGGC AATTGACCTG GTTCCGATTA TTATGGAGAT GACGATCTGG
GGGTCTACCT ATAATCCGCC GGGTAACCCG GAGCTGTTAA AAGCGCTGAC TGAAGATAAA
GAAGGCACGA TCAGGCAATA CCAGCAAAAG CTTGTCCAGG TATTAGATGC GGGCGCGAAG
GTCTAA
 
Protein sequence
MKKIEPRSGC PISFTLDFLG DKWTLLILRD MVVGGKSSYG DFLSSNEKIA TNVLADKLNK 
LEEYGFVTKK VSAEKKNKFL FTLTKKAIDL VPIIMEMTIW GSTYNPPGNP ELLKALTEDK
EGTIRQYQQK LVQVLDAGAK V