| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2060 |
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| Symbol | |
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| ID | 8358212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2510201 |
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| End bp | 2510923 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644964246 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003121755 |
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| Protein GI | 256421102 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACTGTA TAATCGTAGA TGATGAACCG TTAGGAAGAC AAGCGATCCA AAAACTGGTT
CACCAGACAG ACAATCTGGA AGCGATAGGA TCATTTAACG GAGCAGAAGC TACCAAAGCT
TTCCTGGAAA AAAATGCTGT AGATCTGATA TTTCTTGATA TTCAGATGCC GGGAGTGAAT
GGTATCGAAT TTGCCAGAAC CATTCCGAAA ACCACCTTAG TGGTGTTTAC CACCGCTTTT
CATGAATTTG CTTCCGAGAG TTATGACGTA GACGCTATCG ATTATCTGAT CAAACCTGTA
AAACTGGAGC GCTTTCAAAA AGCGGTTGAA AAGGCACAGA CGTATTGTAA ATTATTCCAT
ACCGATCATG CCAACAGCAA CATAGAAAAT ATAACCACTG ACTATTTTTT TGTAAAATCA
GAACGAAGAA TATTCAAAGT CCATTTCAGC GATATACTTT ATATTGAAGG CCTAAAAGAT
TATGTGATCA TTTATTTAGC AAATCAAAAA GTGATCACCC TGATGAATAT CAAAACTATT
CATGATCTGC TTCCAAAAAG TTTTTTTGTC AGGGTCAGTA AATCTTATAT CATCAATGTA
AACAACATAG ATTCTGTTGA TAACAATACG GTATACATAG GGAAAAACGA AATACCGATC
GGCAATATTT ACAGGGATCA CTTCTTTAAT GAATTTGTAA CAAGGAAAAT TTTAGGTAAG
TGA
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| Protein sequence | MNCIIVDDEP LGRQAIQKLV HQTDNLEAIG SFNGAEATKA FLEKNAVDLI FLDIQMPGVN
GIEFARTIPK TTLVVFTTAF HEFASESYDV DAIDYLIKPV KLERFQKAVE KAQTYCKLFH
TDHANSNIEN ITTDYFFVKS ERRIFKVHFS DILYIEGLKD YVIIYLANQK VITLMNIKTI
HDLLPKSFFV RVSKSYIINV NNIDSVDNNT VYIGKNEIPI GNIYRDHFFN EFVTRKILGK
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