| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2052 |
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| Symbol | |
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| ID | 8358204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2501649 |
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| End bp | 2504081 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644964239 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003121748 |
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| Protein GI | 256421095 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGTT TACCTCACCT GGTTTTGATT CTTTCTTTAC TGCCAGTCTT CTCACATGCA
CAAGTGCTGG ACAATGATAG TTCCCGGCAA TCTAACAGCT TAAAAAAGCA GGAAGATAGC
GCACACAGCA ATTTCGTTAG CAAGATGCAG CAATTTGCAG CGGCCACTCA CCAGCAAACC
ATTAATGAAC GAAATGCAGA TAAAGCGGGT ATAGTACAGA ATGAAATCTT TGAGAACCTG
AAGAAGACGA TGCAGCATGC AAAGACCTAT CTGAAGAATG GCATTGATAC CGTTGGCATC
AGCGGGGATA TCTCAAAAAT AAGTGAATGG CATGCCATTG CCGGAGATGG AATCTTTGTT
AATATGGGTA GCGCTCAAAC TTATCGTAAC CTTACTACTT CTTATAACCT GTTAGGGGTA
TTGCAGAAAC GTATCTCGCA TCATAAAACT GAACTTGACA ATTACCATCA TAAGCTATCA
AATTTTCGTT TTCAGATTGA TTCTCTGGCG AGTGATTCAA TGATGTTTGC ATTCCCGGGT
GATTCAGCTG CACTAACAAA ATATCTTGGT AAACTTGCCA CCATTGCCCG TGAGATCTCG
CCAGCCGACA GCATTCTGCA GAAGGCGATG ATTGATGTTG AAGCACTGCA AACGAAGGTC
AACATGGAAT CGTACCGGTT AACTACCAGT ATTGATGAGC TAGAGCTGTA TCAGCGTCAG
CTCCATCGCC GGACATGGAG CAGGGAGTTT ACGTATTTGT GGCAGCCAAC AACCTACGAC
AGATCATTTA CGACAATACT TGGTTATTCA CTTGCAAAAA GCTGGCTTAC ATTCCGGTTC
TATGCACAGA ATAACTATGG GAAAATCCTG TTCATGCTGT TCCTCATCTT CATGACCACT
CTATACATCC GATCACTGAA AACAATATAT CGTCAGCGTG ATTTAATAAG AAATGACTAT
GAGGGCCAAC TGGTGTTGAG ATATCCGGTA CTGACGGCAA TACTTATAAT AGTAAACGTT
TTTCAATTCA TTTTTCCGGC GCCACCGTTC GCATTTAATG CCTTACTATG GTCAGTTTCG
GCCGTCTCAC TGACGCTGTT ATTCCGTCGT TTCATCATTG GCTACTGGAT GAAGATCTGG
ATAGCTTTAT TTTCACTGTT TATCGCGGCC AGCGTGAACA ATTTAATACT TCAGGCATCG
AGAATAGAGA GATGGTTCAT GTTTATGCTG GCTGCCTCCG GTATCTTGGT TACCTGGATA
GTATTTAACA AGCGAAAGAA CTGGCGCCAG CTAAGAGAGC AATGGATCAT TTATTTTATC
GGCTTTCTCC TGCTTCTTGA ACTTGCCTCC ATAATAGCAA ACTGTTACGG ACGCTATAAT
TTATCTAAAA CACTGCTAAC AAGCGGCTAC TTTAACGTTG TAATAGCGAT CATGTTTCTA
TGGACTGTAC GCCTGATAAA TGAAGGTCTG GAGCTTGCAT TTAATATCTA CTCAACACAG
GACAGAAAAC TTTTCTATCT TAACTTCCAA CGTATCGGCA ACAGGGCGCC AAAGCTTTTT
TATCTCTTTC TTATAGTTGG CTGGTTTATA TTGTTTGGCC GTAATTTTTA CGCATTCCAC
CTGGTCACCG GGCCGGTTCA AACTTTGCTT TCTGAAGAAC GAAGTGTTGG GGACTATACA
TTTACAATCA ATACGCTGCT TTTATTTGTG CTCATTATGG GGCTGTCAGT AGTGATATCA
CGAATTGTCT CTTACTTTGC AGCTGACCGC CATCTCAATA ATGAACATCC TGGTAAAACT
GAAGGCACCG GAATTGGAAG CTGGCTATTA TTAATCAGAA TATTCATTAT CACTTTAGGG
TTGCTACTAT CCTTTGCCGC AGCCGGTATT CCTATGGACA AGTTAGCTAT CATTCTTGGT
GCTTTAGGAG TTGGGATAGG CTTTGGTTTA CAAACACTGG TGCACAATCT TGTTAGTGGA
CTTATTATAG CGTTTGAAAA ACCTGTAAAT GTCGGTGATA TTGTCGAGAT TGATAAACAA
TCCGGCGTCA TGAAATCAAT AGGATTTCGC AGTAGTGTCT TATCAACATG GGACGGGGCG
AATATGGTGA TGCCAAACGG AGATCTGCTT AATTCTCATC TCATAAACTG GACGCTCGGC
GGCAACCGGC GGCGCATGCA GTTAACAGTA AACGTTGCTT TAAACTCAGA TCTTGAAAAA
GTGCAGGTAT TACTACAGAA AGTTTTAGAT TCAGATGACC GGATATCAAA ACAAAAGAAA
CCTCTGGTAC TTTTTGACGA ATTTGTCAAC AGTTCAATTA ATGTAAAAGT TATATATTGG
CTGAATGACT ACCGAAACGA CATTACTACA AAAAGCGACC TGATTATCGC CATTCAAAAA
GCATTTCAGC AAAACGATAT TACATTTCAT TAG
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| Protein sequence | MFRLPHLVLI LSLLPVFSHA QVLDNDSSRQ SNSLKKQEDS AHSNFVSKMQ QFAAATHQQT
INERNADKAG IVQNEIFENL KKTMQHAKTY LKNGIDTVGI SGDISKISEW HAIAGDGIFV
NMGSAQTYRN LTTSYNLLGV LQKRISHHKT ELDNYHHKLS NFRFQIDSLA SDSMMFAFPG
DSAALTKYLG KLATIAREIS PADSILQKAM IDVEALQTKV NMESYRLTTS IDELELYQRQ
LHRRTWSREF TYLWQPTTYD RSFTTILGYS LAKSWLTFRF YAQNNYGKIL FMLFLIFMTT
LYIRSLKTIY RQRDLIRNDY EGQLVLRYPV LTAILIIVNV FQFIFPAPPF AFNALLWSVS
AVSLTLLFRR FIIGYWMKIW IALFSLFIAA SVNNLILQAS RIERWFMFML AASGILVTWI
VFNKRKNWRQ LREQWIIYFI GFLLLLELAS IIANCYGRYN LSKTLLTSGY FNVVIAIMFL
WTVRLINEGL ELAFNIYSTQ DRKLFYLNFQ RIGNRAPKLF YLFLIVGWFI LFGRNFYAFH
LVTGPVQTLL SEERSVGDYT FTINTLLLFV LIMGLSVVIS RIVSYFAADR HLNNEHPGKT
EGTGIGSWLL LIRIFIITLG LLLSFAAAGI PMDKLAIILG ALGVGIGFGL QTLVHNLVSG
LIIAFEKPVN VGDIVEIDKQ SGVMKSIGFR SSVLSTWDGA NMVMPNGDLL NSHLINWTLG
GNRRRMQLTV NVALNSDLEK VQVLLQKVLD SDDRISKQKK PLVLFDEFVN SSINVKVIYW
LNDYRNDITT KSDLIIAIQK AFQQNDITFH
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