| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1998 |
|---|
| Symbol | |
|---|
| ID | 8358149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2435388 |
|---|
| End bp | 2436446 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644964185 |
|---|
| Product | Cytochrome-c peroxidase |
|---|
| Protein accession | YP_003121694 |
|---|
| Protein GI | 256421041 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.329942 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGGA AAGTGATATA TCTGCTTTGT GCTTTCTGCC TGTGGTACTG GCTCATGGGA
GGAGATCGTG ATGCGTTGAC GGCTCATTCT CCGGTAGTGG AATACTACCA GCTGAAAATA
CCGGACAGTC TGCCTCCGCC GGTATACAAT TTCAAAAACA ACCCGCTTAC AAAAGAAGGG
ATCGCCCTGG GCAGACACCT GTTTTATGAT CCCAAGCTCT CCGTAGACAG TTCTATTTCC
TGTGGTTTCT GCCATCAGCA GTTTGCTGGT TTTGGCCACT ATGACCATGC CCTTAGTCAT
GGAGTGTTAG GCAGAACGGG CAACCGGTCT GTACCGACCT TGTTCAACCT GATCTGGCAG
AAGGACTTTA TGTGGGATGG CGGCGTCAAT CATCTCGATA TTCAGCCTTT AACGCCTATT
ACAGACGAGA ACGAGATGGG GATGGATCTC AAGGCGTTAA TTGATCGTTT GCAGGGAAAT
CAGACCTATA AGCGGCTTTT TAAGGCAGCC TATGGTTCAG AAACCGTAAC CAGTGAACGG
ATGTTCAAGG CCTTGTCACA ATTTATGGCG ACCATGCTTT CTTTTGAGTC TAAATATGAT
AGTGTTATGC GCCGGGAGCC AGGGGTGACT TTTACGGCAG AGGAGCAGGG CGGATATCGT
ACGTTCATGC AGAAATGTGC CAGTTGCCAT AAGCCGCCTT TGTTCACTGA TTACAGTCTG
CGGAACAACG GACTGCCGTA TCTGCCTTCT ATGAATGATG TGGGCCGTAT GCGTATCTCC
AATAACACAG CAGATTACCT GAAGTTTAAG GTGCCTTCGC TGCGCAATGT ACTGGTTAGT
TCGCCCTACA TGCACGACGG GCGTTTCTTT GATATTTTCC AGGTATTTGA TATGTACGAT
CACGGGCAGG AAAAGGGGAA TACCATTGAT CCTCTTGTGA AGAATGGTAT CCCCCTGAAT
CCGAAAGAAC AGCGTCAGCT GTATATGTTT CTGAATACGT TGACCGACAA AAAATTTCTT
AAGAACCAGG ACTTCAGCGA AATCCTGATC ACCGATTAA
|
|---|
| Protein sequence | MTRKVIYLLC AFCLWYWLMG GDRDALTAHS PVVEYYQLKI PDSLPPPVYN FKNNPLTKEG
IALGRHLFYD PKLSVDSSIS CGFCHQQFAG FGHYDHALSH GVLGRTGNRS VPTLFNLIWQ
KDFMWDGGVN HLDIQPLTPI TDENEMGMDL KALIDRLQGN QTYKRLFKAA YGSETVTSER
MFKALSQFMA TMLSFESKYD SVMRREPGVT FTAEEQGGYR TFMQKCASCH KPPLFTDYSL
RNNGLPYLPS MNDVGRMRIS NNTADYLKFK VPSLRNVLVS SPYMHDGRFF DIFQVFDMYD
HGQEKGNTID PLVKNGIPLN PKEQRQLYMF LNTLTDKKFL KNQDFSEILI TD
|
|---|
| |