Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1992 |
Symbol | |
ID | 8358143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2430836 |
End bp | 2431663 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964180 |
Product | amidohydrolase 2 |
Protein accession | YP_003121689 |
Protein GI | 256421036 |
COG category | [R] General function prediction only |
COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.776657 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATAG ACGCACACCA GCATTTCTGG CAATATCACC CTGTAAAGGA TGCCTGGATC ACAGACGATA TGAAAGTGAT TCAGGAAGAT TTCCTGCCGC AGCACCTTTT ACCTGTATTA CAGGAGAATG GTGTGGATGG CTGTGTTGCT GTACAGGCAG ACCAGTCAGA AACTGAAACC GGCTTTCTGC TGGCACTTGC AGATCAACAC GCTTTTATCA GAGGAGTAGT AGGATGGGTG GACCTTCGGG CGGAAAATCT TTCCGACAGA CTGGCCCATT ACCGCCAGTA TGAAAAACTG AAAGGATTCC GTCATATTGT GCAGGGAGAA CCTGATCCTT CCTTTATTCT CAGGGAGGAT TTCTGTAAGG GAATAAGGGC GCTGGCTGCA CATGATTTCA CATACGACAT ACTGGTGTAT CCTGTGCAAT TGCCTGCAGT TGCAACGTTT GTACAACAGT TCCCTGATCA GCGGCTGGTC ATAGATCATA TGGCAAAGCC TTACTTCAAA ACAGGTGATA TCAGTGCCTG GGAAACACAT ATGCGGGCAA TCGCGCAGCA ACCTAATGTT TACTGTAAAC TCAGTGGACT GGTAACAGAA GCGGACTGGC AGAAATGGGA ACTTTCTCAT TTTGCTCCTT TCCTGGATGT TGCGCTCGAT GCTTTTGGCG CTGAACGACT GATGTTTGGT TCCGACTGGC CGGTATGTAA GCTGGCTGCC AGCTATACAG AAGTGAAAGC AATTATTACC GATTATATCA GCCGTCTTTC CGATGCGGAA AGAGCGGGCA TTATGGGCGG AAATGCGGTG AGGTTCTACG GACTGTAG
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Protein sequence | MIIDAHQHFW QYHPVKDAWI TDDMKVIQED FLPQHLLPVL QENGVDGCVA VQADQSETET GFLLALADQH AFIRGVVGWV DLRAENLSDR LAHYRQYEKL KGFRHIVQGE PDPSFILRED FCKGIRALAA HDFTYDILVY PVQLPAVATF VQQFPDQRLV IDHMAKPYFK TGDISAWETH MRAIAQQPNV YCKLSGLVTE ADWQKWELSH FAPFLDVALD AFGAERLMFG SDWPVCKLAA SYTEVKAIIT DYISRLSDAE RAGIMGGNAV RFYGL
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