Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1934 |
Symbol | |
ID | 8358085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2360677 |
End bp | 2361771 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644964122 |
Product | peptidase S1 and S6 chymotrypsin/Hap |
Protein accession | YP_003121631 |
Protein GI | 256420978 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.82848 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAT TTTCATTGAT ACGTGATATT GAACGCTACC TGGAGGGCGA AATGAACGAG CAGGAAAAAA CTGCCTTCGA AGCGCTCCGC CAGTCCGACC CGGCGGTCAA TGAGCAGGTG CTGGCACATC AGCAGCTCAT TACACAGCTG GCGTATTTTG GACGCAGGTC AGCGTTGCAG GAAAAAATGG ATAAGATCCA TGCTGGTCTG GCTAATAAAC ATGTATCAAT TGCACCTTCG TCAACGCCGG AACCAAAGAA AGTATTCTCC ATCAGCAGAA GATTGCTCCT CAACATGGCT GCAGCAGCCG GTATTGCCCT GCTGACCTCT GTGTCTACCA TTGCATTTAT GCAAAGAGCG AGCAGACAAA AGACTACTGC CGAATACGAG GACGTAAGAC GTGTACTGAA TCACATTCAG CGCTCCCAGA ACGCCCTTAT TAATGATATT AACAGCTCCA AAAAAGCACC TGCCAACCCC GGCACTTATG GTGGCACCGG GTTTGCCGTA TCTAATAACG GTTATGTAGT GACTAACTAC CACGTCATTG CAGGGGCTGA CTCTATTTAT ATACAGAATA CCAAAGGAGA AGCCTTTAAA GCAGCCAGCG TATTTGAGGA TATTACCGCC GATCTGGCCA TCCTCAAAAT CACAGACTCT ACCTTTAAAG GTCAGCCACT GCCTTACTCT CTGAAACCAC AGCGCGCCAT GCGTGGTGAA CAGGTCTTTA CCCTGGGTTA CCCAAGAGAT GAGATCGTTT ACGGAGAAGG TTACATCAGC GCTCAGACCG GCTTCAACGG TGACAGCGCC GCCTACCAGG TGTCTATCCC GGTTAACCCC GGTAACAGCG GTGCTCCGCT GATGGACAAC AAAGGTGACG TAGTAGGTAT CGTAACCGGC AAACAGACGA CTGCTGACGG CATCGCCTTC GCGGTAAAAT CAGCACACCT GAAAAGACTG CTGGAACAAA TGCCCAAAGA CAAACTGCCT AAAAAAGAAT GGAACCATAA AAACAATAAA CTCGAAGGAC TGAGCCGCGT AGAGCAGGTG AAGAAACTGG AAGACTTTGT TTACATGGTG AAAGTCTATA ATTGA
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Protein sequence | MNEFSLIRDI ERYLEGEMNE QEKTAFEALR QSDPAVNEQV LAHQQLITQL AYFGRRSALQ EKMDKIHAGL ANKHVSIAPS STPEPKKVFS ISRRLLLNMA AAAGIALLTS VSTIAFMQRA SRQKTTAEYE DVRRVLNHIQ RSQNALINDI NSSKKAPANP GTYGGTGFAV SNNGYVVTNY HVIAGADSIY IQNTKGEAFK AASVFEDITA DLAILKITDS TFKGQPLPYS LKPQRAMRGE QVFTLGYPRD EIVYGEGYIS AQTGFNGDSA AYQVSIPVNP GNSGAPLMDN KGDVVGIVTG KQTTADGIAF AVKSAHLKRL LEQMPKDKLP KKEWNHKNNK LEGLSRVEQV KKLEDFVYMV KVYN
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