Gene Cpin_1910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1910 
Symbol 
ID8358061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2331636 
End bp2333261 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content49% 
IMG OID644964098 
Producthypothetical protein 
Protein accessionYP_003121607 
Protein GI256420954 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.544837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGTG CATTTAGTGC CCAGGCACAG ACACAATTTA CGTATTCGAC GACCTGCCAG 
AATGATAGTG TTAGATTTGA AATAGCTGAA GCGGACCTCG CAGGCATAGA CTCCGTACGA
TGGTATTTCG GCGACCTGGC CTCCGGGGCT GCGGATACAT CCCGCAGAAT CAAAGGCGCC
CATCTTTACA ATACCGTCGC TGCCTACACT GTGCAACTGA TCGCCTACAG AGCAGGCGTT
CCGTCAACAT CTACCACGAA TCTGAACATT GTGGCGCCCG TCATCTATGA TTTCGGCCCT
ACCGATCAGA CCCTTTGTGA TAGTACGACC ATTACACTGA CAGCACCGGA CGTACCGGGA
GCCACGTATG AATGGCAAGA CGGCTCCACC GGCCGGAGTA TCCTTGTTGA CAGCATGACC
ACCTATAAGG TAAAGATCAA TGGCTGTCTT ATACCCGATT CCGTTAACAT TTTTTATACG
CCCGTTCCGG AGATTGATCT GGGTGACAGC AGTCTGATAC TGTGTCTCGG TGAGACCATC
GAGCTGGATG CAACTGCTCA GAACTGTACC TATATCTGGA ACACCGGTGC AACCACCCCT
AATATCATTG TACACAGTGA TGTGGCCATG CCATCTACGC CATACATCGT TACGGCCGAT
GCACAAGGTT GTGGCCTCTA CCGGGATACA ATCTATATCG CTTTTGCCGG CGCAGCACAT
CCTTTCTCAC TGGGCAAAGA CACGATACTT TGTCCGGGAG AATCCATTAC ACTGGATGCG
ACCACACCTG GCGCTACCGG CTACCGCTGG GGTAACCGCG CTATCACACC AACTACCACA
ATCAGAAGTA ACTGGGATCT CTGGGTATTT GTAGAAATCA ACAATACCTG TGAAGTACTG
GATACAGTCC TGATCCGCTA TAAACCAGAC AGAGCGCTTG ATCTCGGCAA CGATACGATT
GTATGTAAAG GCGAAACACT GGTACTGAAA GCTGATTTCG GAACAGCCTC CTATCGCTGG
CAGGACACCT CCAAACAGGC GACTTTCTAC GTGAGAGAAA CCGGTTATTA CTGGGTAGAA
GCAAAAGTAG GCCGTTGTAT TGACCAGGAT ACGATTCACG TACAGTTTGA AGATACCTTA
CGCACGAACT TAGGACACGA CACCCTCTTG TGTATGGGCA CCGTATACAA TCTGCATCCT
GACGGAGCAG GTATGAATTA TAAATGGCAG GATAGTTCTT CCTTGCCGAT CTTCCCCGTC
ACGCAGGCAG GACACTATGC GATTGTCGCT AACAACAGTT GCGGACAATC AATCGATGAA
GTGGATATTG CGTTCCAGGA ATGTGGTTGT CAGGTATATC TGCCCACAGC CTTTACACCG
AATGCAGATG GTGTGAATGA CTACTTCCGA CCGAAATTCC GATGTCCCAT TACAGAATTT
GAGTTGGTCA TTTTTAACCG GTGGGGCCAG CGCATCTACT ATACCACCGA TCCGGATGTA
GGCTGGAAAG GTACCTGGCA GAAAGGAAGA GTACCGTTTG GCTCCTATGT CTGGATGATG
GATTACAAAG TGGTATCAAC CGGAGAGAAA GTGAAAAAGA CAGGTTCTGT AACAGTGATC
TACTAA
 
Protein sequence
MLGAFSAQAQ TQFTYSTTCQ NDSVRFEIAE ADLAGIDSVR WYFGDLASGA ADTSRRIKGA 
HLYNTVAAYT VQLIAYRAGV PSTSTTNLNI VAPVIYDFGP TDQTLCDSTT ITLTAPDVPG
ATYEWQDGST GRSILVDSMT TYKVKINGCL IPDSVNIFYT PVPEIDLGDS SLILCLGETI
ELDATAQNCT YIWNTGATTP NIIVHSDVAM PSTPYIVTAD AQGCGLYRDT IYIAFAGAAH
PFSLGKDTIL CPGESITLDA TTPGATGYRW GNRAITPTTT IRSNWDLWVF VEINNTCEVL
DTVLIRYKPD RALDLGNDTI VCKGETLVLK ADFGTASYRW QDTSKQATFY VRETGYYWVE
AKVGRCIDQD TIHVQFEDTL RTNLGHDTLL CMGTVYNLHP DGAGMNYKWQ DSSSLPIFPV
TQAGHYAIVA NNSCGQSIDE VDIAFQECGC QVYLPTAFTP NADGVNDYFR PKFRCPITEF
ELVIFNRWGQ RIYYTTDPDV GWKGTWQKGR VPFGSYVWMM DYKVVSTGEK VKKTGSVTVI
Y