| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1800 |
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| Symbol | |
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| ID | 8357951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2186845 |
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| End bp | 2190021 |
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| Gene Length | 3177 bp |
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| Protein Length | 1058 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963988 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003121497 |
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| Protein GI | 256420844 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACT TTTTATTCCA CAAGAAACTG TTATTGCCCG GAGCCTTGTT GTTACAAATG
ATGGCATCCG CACAGCAACT GGCCGTTAAT AATTCCAACG CAACGCCGCC GGCCATTGCT
CAGGCAAAAG AAATTATCCT CAAGGGAAAA GTAATAGGGA CAGAAGAAGG TACCGGCCTG
CCCGGAGTAG TTGTACGTGT AAAAGTCGGC AACAAAGGGA CTACCACTAT GCCTGACGGC
TCCTATACAC TCAAGGTACA CGAGAATTCA ACCATCGTCG TATCCCTGAT CGGATATGTT
ACACAGGAGA TCCCTGTTAA CAAAAAAGAG AATATCACTG TTTATCTGGC CAAGGATGTG
AAAGCCCTGA CAGAAACAGT TATCATTGGT TATGGTACAC AGAAACGCGC CAATGTACTC
GGTGCTGTTG CTGCCGTGAA TGCCAGTGAT ATTGAAGACC TGCCGGTAGC CAATCTGGCA
ACTGCCCTGC AGAACAAAGT ACCTGGTGTG TCAGTGGCGC AATCTTCTGG TCGGCCGGGT
TCCTCTACCA GTCTGACCAT CCGTAATCCG GTGACCTGGG CTGCAACTGG CTCCTCTATT
GATCCATTGT ATGTAATCGA CGGTTTCCAG CTGACAAAAC AGGATTTTGA CAACCTGGAT
GCTACCCAGA TAGAAAGCAT TACTTTCCTG AAAGACGCGG CTGCTTCGAT CTATGGCGCC
CGTGGTGCGA ATGGTGTGGT ACTGGTAAAA ACCAAAATGG GCCGCCCGGG TAAACCCCGT
ATCAGCTATT CAGGTTCGCA TGGTATTTCT TCCGCTACCT ATATTCCGGA GATGCTGACG
GCTCACGATC ATGCTGTGCT GTTGAATAAT AAGTATACTG CGCTGAAAGA CGCGAATACA
AATAAATTCT ATACACCGCA GGAGCTGGAA TATCTGCAAA CGCATAACAA CAACTGGATT
GACAATGTAT GGAAAAGCTC TCACCTGAGC CGTCATACTA TCAATGTCAG CGGTGGTACA
GAAAGAATTA CCTTCTTCGC AGGTGGCAAC TACTATTCAG AAGATGGTAA CGTCGGCGAT
CTGAATGCGA CCAAATATGG TCTGCGTATG GGACTCAATA CCAAGATCAC CGACAACCTG
ACCGCTACGA TCTCGTTTGC AACAGATAAT TCAAAGATCA ATCGTCCTAC GCCCAAAACA
GTGCAGTCCG GCCTGACTGA ACAGTCCGAC CAGATGAGTG CTACCGTAAG CGCCCTTTTG
CTGACACCGG GATGGGTACC GATGTATATC GACGACAGGC CTGTATTTTC ATCCGTACCA
GGATGGCATC CGGGAGAACT GGTAAAAACA GGTAGTTACA GCCGCTCCCG TACACAGGGA
CAGACGATCA ATGCGGCCCT GGAATATAAA CTGCCGGCTG TGGAAGGCTT GTCTTTCCGT
GTGCAATATG CACGTAGTAA CAGGAATAAC TTTGGTAAAG AATTCTATGT GCCTTATTCC
CTGTACAACT TCGTAAAAGA AGGTACACAT GAGACGACAC AGAATGTGAT GTTTACCAAT
CAGCTGACTA CCAACAATCC GACTACCCTG ATCAAGAACG GTAACCTGAT GACGGAATCT
TATGGTAGTT CTTCCAGTTA TCAGCTGAAT GAGGCCATCA ACTATGCCCG CAGCTTCGGT
AAACATGATA TAGCGGTAGT ACTCGTAGCA GAACAGAGCG AATCTTCTTC TGACGCATTT
GATACCCGCC GTGAGCAGGT CGTAATACCA GGTATCGATG AACTGTTTGC TTTCAGCCAG
GACAAAAGTT TTTATGATAA CTCTGGGTCT TCCGGAGAAA CAGGCAGGAT GAGTTATGTC
AGCCGTATCA ATTATGCCTT TAACGACCGG TACCTGCTGG AAGCGACCTT CCGTGCAGAT
GCCTCTCCTA ACTTCCCGAA AAACTCAAGA TGGGGTTATT TCCCTTCTGT AGCGGTTGGT
TGGAGAGTGT CCCAGGAGAA ATTCTTCCAT GATAATGTGA AATTTATCAA CGACCTGAAG
ATCCGTTTCC AGGTTGGTCT TACTGGTAAC GATGCGGTGA AGAACTACCA GTACAAAGAG
CGTTATACAC AAACCACCGG TATGCTGTTT GGTAACACGA TGACCAGCGG TTTGAATAAC
AATGATATTC CTAACAGTAG TATTACCTGG GAGAAAGCCC TGTATAAGAA CCTGGGTTTT
GATGGTAGTT TCTTTGACCG CCGCTTCGAT TTCGCCATTG ACCTCTATCA CCGTTATAAC
TATGACATGC TGATGCAACC AAGCAATACA GTGCCTACCA GTTTTGGCGG TGGTATTGCT
GATCAGAACT ATGGTCGTCT GAAGTCATAT GGTATAGAAG CAGGACTGAC TTACAACGGC
AAAATCGGCA AAGAGTTCAA GTACTACACC ACCGTCAACT TCGGTATCAG TGATAATAAA
GTGATCCGCA AATACTACGG CGCTGGCGAT ACTGCCTGGA GAAACCCGAT CGGTCGTAGA
ACCGACAGCG GACTGGAAGG ATACAAAGCG GTAGGTATGC TGCGCACACA GGCAGATGTC
GATGCATTGC TGGCTAAAAA TCCAGACTGG ACGATTGATG GCGAAAAGCC GATTCCCGGA
TACATGAATT ATGAAGATAT CAATAGCGAT GGTAAGATCA ATGAAATGGA TAAGACCCGC
ATTGCACCAA GAGGTAGCAG TCTCTTTGGT GTAGGCTTCA ACCTGGGCGC ATCCTGGAGA
TCTTTCAAGT TCAGTGTGAA CATGTCGCTG CAGGTAGGTG GTCAGACGGT ATATGATAAG
ACAGCAAGAA CACCGGCGAA TGAAAACCAG CGTGCACTGG CTATCTGGAA AGATTCCTGG
TCACCGGAGA ATCCAAATGC GAAGTATCCG CTGATCAATG CACCACTGAT CAAAGAAATA
TCCGATATCT GGATGGTAAG CGCAACCACT ATGAGAGTGA ACAACATGAT GTTGTCTTAT
GGTCTTCCGC AGAACCTGGC CTCCCGCTGG AAAATACCTG ACCTGCGTGT GTTTGTGACA
GGTACGAATC TGTGGTCTAT TATCAACCAT CAGTCTTACA AAGATCCGGC TACCAACCTG
GCAGTAGATT ATCCTGCCCT GCGTACCTAC ACTTTTGGCC TGAATGTAAG TCTCTAA
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| Protein sequence | MKDFLFHKKL LLPGALLLQM MASAQQLAVN NSNATPPAIA QAKEIILKGK VIGTEEGTGL
PGVVVRVKVG NKGTTTMPDG SYTLKVHENS TIVVSLIGYV TQEIPVNKKE NITVYLAKDV
KALTETVIIG YGTQKRANVL GAVAAVNASD IEDLPVANLA TALQNKVPGV SVAQSSGRPG
SSTSLTIRNP VTWAATGSSI DPLYVIDGFQ LTKQDFDNLD ATQIESITFL KDAAASIYGA
RGANGVVLVK TKMGRPGKPR ISYSGSHGIS SATYIPEMLT AHDHAVLLNN KYTALKDANT
NKFYTPQELE YLQTHNNNWI DNVWKSSHLS RHTINVSGGT ERITFFAGGN YYSEDGNVGD
LNATKYGLRM GLNTKITDNL TATISFATDN SKINRPTPKT VQSGLTEQSD QMSATVSALL
LTPGWVPMYI DDRPVFSSVP GWHPGELVKT GSYSRSRTQG QTINAALEYK LPAVEGLSFR
VQYARSNRNN FGKEFYVPYS LYNFVKEGTH ETTQNVMFTN QLTTNNPTTL IKNGNLMTES
YGSSSSYQLN EAINYARSFG KHDIAVVLVA EQSESSSDAF DTRREQVVIP GIDELFAFSQ
DKSFYDNSGS SGETGRMSYV SRINYAFNDR YLLEATFRAD ASPNFPKNSR WGYFPSVAVG
WRVSQEKFFH DNVKFINDLK IRFQVGLTGN DAVKNYQYKE RYTQTTGMLF GNTMTSGLNN
NDIPNSSITW EKALYKNLGF DGSFFDRRFD FAIDLYHRYN YDMLMQPSNT VPTSFGGGIA
DQNYGRLKSY GIEAGLTYNG KIGKEFKYYT TVNFGISDNK VIRKYYGAGD TAWRNPIGRR
TDSGLEGYKA VGMLRTQADV DALLAKNPDW TIDGEKPIPG YMNYEDINSD GKINEMDKTR
IAPRGSSLFG VGFNLGASWR SFKFSVNMSL QVGGQTVYDK TARTPANENQ RALAIWKDSW
SPENPNAKYP LINAPLIKEI SDIWMVSATT MRVNNMMLSY GLPQNLASRW KIPDLRVFVT
GTNLWSIINH QSYKDPATNL AVDYPALRTY TFGLNVSL
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