| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1785 |
|---|
| Symbol | |
|---|
| ID | 8357936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2166367 |
|---|
| End bp | 2168091 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644963973 |
|---|
| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
|---|
| Protein accession | YP_003121482 |
|---|
| Protein GI | 256420829 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC TCAGATGGCT GACCATCATC ATCGGTGTAC TTTGCGTAGC CTGTAACAAA
GGCTATGACC GGATGCTGGA AAACAGGGAA TATGAAGATA CAACCGGTGT AACGGGCCGA
CAGCCTAAAA TACTGTTCCT GGTAGTAGAC GGCGCCCGGG GAGAATCTGT CAGAAATGCA
CAGGCTACTC ATTTGCAGAT GCTGGGAGAT AATGCGATCT ATTCCTGGAA TAGTCTCAGC
GATACACTGA ACCTGAATGC GACCGCATGG GCGGATCTGC TGACCGGTGT ACGCAAGGAA
AAACATGGGG TGGTAAAAAG CGATTTCAGT GATAACAGGC TGTCGCAGTA TCCGGTGTTT
TTTAAATACA TCAAAGCGCG TATGCCTGCT TTTCGTATTG CTGCATACAG TGCTTCTGAT
TCATTGGGTA AGATGCTGAT CACGGACGCA GATGTAAACC GCACCTTTTC AAATGATGAT
GACGCAACGG AACTGGCTAT AATAGATGAA CTGAAGGTGG ATACTGCCGG ACTGATATTC
GGTCAGTTCA GCCAGGTAGC TACTGCCGGT AAAACATACG GTTATGATGT AAGTGTTCCT
GAATATAAGG CCGCTATTCA GCGGGTGGAT GACTACGTCG GTAATATCAT GAACGCGTTG
AAACAGCGTA AGAACTATGC ACATGAAAAC TGGCTGGTGA TCGTTACCTC TGGTAATGGT
GGTCCGCACG AATTGAAGCC GGAAGACGAT GATGGTACTA TTCTCAGCAA TCCTAAGATC
AATACCTTCA CGATCTTTTA TTCTCCCCGC TATATGCCCA ATTTCATCGA CCGTCCTTAT
ACAGGTAACC GCTATACAGG TAAGTCAGTA AGACTGTATG GTAAAACAGC AGCTACCGCT
GTATATGCCG ATATCAATGA AGGAAAGGAA GACCTGAACC TTGGCAAGAC CAATCAAATA
ACCATTGCCC TGAAGATCAG AAAGAACAAA ACCGTTTACG GCGATTACTC CTACACTTAT
CCCAATATCA TCGGTAATAA CCTCTCTAAT GACTGGTGGA AAAACACCGG CTGGAGTATG
TCACTGGAAA CAAATGCCTG GGGCGTACAT TATGGACAGA ATGGTGCTGG TTTCAATATG
GTAACCGGCG CTAATATCAG TGATGGTAAA TGGCATGACC TGACAGCCGT ATTCCTGAAC
AGAGATAATA AGCGCTTTAT ACGCCTGTTC ACCGACGGTA ATTTCAATAC GGAACAAGAA
ATAACCTCCT ATGGAAATTT CGATAATGGA TCTCCGGTGA CATTAGGCTG GGTGCCGGCG
AACGTTGTGG ATGATAATCG CTGGCTGAAT GCCAATGTTA CCGAGATCCG TTTCTGGCGC
GCAGCCTTAC CGGATAGTGT GATCAAAGCT TATGTATGCG CAGAAGAATT GCCTTCTTCG
CATCCTTACC GGGATTACCT GATCGGCTAC TGGCCCTGCC GGGATGGTTT TGGCGGCGTC
TTTAAAGATC AGTCAGAGTA CCGGCATGAC TTTGTTATAC ACGGTGCTCA CCAATGGGAT
GACTTCAATG ACCTGATGTG CCCAAGTACA GCCACAAATC TGGCGCAACT GGTACCTCAG
CCGGTGGATG TAGCCCGTCA GGTATTGAAC TGGCTACAGA TCGCCGCAGA TACAAAATGG
CAGATGGATG GAAGGGTATG GGTTACTTCC TATGCCAGCC TCTGA
|
|---|
| Protein sequence | MKKLRWLTII IGVLCVACNK GYDRMLENRE YEDTTGVTGR QPKILFLVVD GARGESVRNA
QATHLQMLGD NAIYSWNSLS DTLNLNATAW ADLLTGVRKE KHGVVKSDFS DNRLSQYPVF
FKYIKARMPA FRIAAYSASD SLGKMLITDA DVNRTFSNDD DATELAIIDE LKVDTAGLIF
GQFSQVATAG KTYGYDVSVP EYKAAIQRVD DYVGNIMNAL KQRKNYAHEN WLVIVTSGNG
GPHELKPEDD DGTILSNPKI NTFTIFYSPR YMPNFIDRPY TGNRYTGKSV RLYGKTAATA
VYADINEGKE DLNLGKTNQI TIALKIRKNK TVYGDYSYTY PNIIGNNLSN DWWKNTGWSM
SLETNAWGVH YGQNGAGFNM VTGANISDGK WHDLTAVFLN RDNKRFIRLF TDGNFNTEQE
ITSYGNFDNG SPVTLGWVPA NVVDDNRWLN ANVTEIRFWR AALPDSVIKA YVCAEELPSS
HPYRDYLIGY WPCRDGFGGV FKDQSEYRHD FVIHGAHQWD DFNDLMCPST ATNLAQLVPQ
PVDVARQVLN WLQIAADTKW QMDGRVWVTS YASL
|
|---|
| |