| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1751 |
|---|
| Symbol | |
|---|
| ID | 8357901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 2122528 |
|---|
| End bp | 2124258 |
|---|
| Gene Length | 1731 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644963938 |
|---|
| Product | coagulation factor 5/8 type domain protein |
|---|
| Protein accession | YP_003121448 |
|---|
| Protein GI | 256420795 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3507] Beta-xylosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA CAATCTACCT CATTTCCCTG CTATGTTTCT TCACTACGGG AAATGCCCGG
CAACGCACTT ACTGCAACCC CATCAATATC GACTACGGTT TTACCCCTAT TCCTAACTTT
TCAGAAGCCG GCCGGCACCG GGCTACTGCG GACCCTGTCA TTACTTTATT TAAAGGCGAT
TATTACCTGT TTTCTACTAA TCAGTGGGGC TACTGGTGGA GCAGTGATAT GTCTGACTGG
CATTTCGTAC CCCGGAAATT TCTCAAACCT TATCACAAGG TGTATGACGA ATTATGCGCA
CCTACGGTCT TTGTATCAGG CGATACGCTA TTGGTCATCG GGTCGACTTA TGAAAAGAAT
TTCCCTATAT GGATGAGCAC CCATCCCCGT ACGGACGACT GGACAGAAGC GGTAGATTCA
TTCCGTGCCG GCGCCTGGGA TCCGGCCTTT TTTCTGGATG ACGACAATCG CCTGTATCTC
TATCATGGGT CCAGTAATAC TTATCCCTTA TACGGACAGG AAGTAGACCG GCATACGCTG
CAACCTACCG GGGCACGACA GGATCTTATC CGTCTGCATG ACGACCAACA TGGATGGGAA
CGTTTTGGAG AGTATAACGA CAACAACTTC ATGTCGCCTT TTATGGAAGG CGCCTGGATG
AATAAACACA ATGGCAGGTA TTACCTTCAG TACGGCGCTC CCGGCACTGA ATTCAGCGGT
TATGCAGATG GCGTATATGT CAGTGATCAT CCGCTGGGAC CTTTTAGTTA TCAGGCGCAT
AACCCTTTTA GTTATAAACC GGGTGGCTTT GCCCGGGGCG CTGGTCATGG TGCTACCTTT
CAGGATAAAA ACAAGCGTTG GTGGCATGTA TCAACGATTG TGGTGAATGT GAAGAATAAC
TTCGAAAGAA GGATCGGAAT TTGGCCTGCC GGATTTGACA AGGATGGTAT TCTCTATTGT
AATACGGCCT TTGGCGATTA TCCACATTAT CTTCCGGGAG AGCCCGAAAG CGGACAATTT
ACCGGCTGGA TGCTCTTGAA TTATCAGCAC CCGGTCTCTG TTTCTTCCAC TTATGGTGCT
TTTGCTGCAA ATAATGCGGT AGACGAAAAC ATTAAAACAT ACTGGTGCGC TACTACTGCC
AATCCGGGTG AATGGATACA GACAGACCTG GGACAAACAG CGACCGTACA CGCCATCCAG
ATCAATTATG CCGATCAGGA TGCCGATATC CTGGGGAAAC GGACCGATAT CTATCACCAA
TACCGTTTAT GGCACTCAAC AGATGGCAAA AAATGGCAGC TTTTATGTGA CAAAAGCCGG
AACAAAACGG ATGTGCCGCA TGACTATATA GCACTCACCC AGCCTGTTAA AACCCGTTAT
ATCAAACTGG AAAATATCCA CATGGCCAAT GGTAAATTCG CCATCAGCGG ATTAAGGATA
TTCGGTAAAG GAAACGGACC GGTACCGGCA GCAGTAAATA ATTTCATGGT ACTGCGTCAG
CAATCTGATA AACGAAATGC CTGGCTGAAA TGGTACCCTT CCAATGATGC TTATGCCTAT
AATATCTACT ATGGTATCGC CCCTGACAAA CTATACAGCA GCATTATGGT ATATAATGCC
AGCGAGTACT ACCTGAAAGC GCTGGACAAA ACAACGACCT ATTATTTTTC CATAGAGGCC
CTGGGTGAAA ATGGCATTGG CAAAAGGAGT CCGGTGATTA AAATTGAGTG A
|
|---|
| Protein sequence | MKNTIYLISL LCFFTTGNAR QRTYCNPINI DYGFTPIPNF SEAGRHRATA DPVITLFKGD
YYLFSTNQWG YWWSSDMSDW HFVPRKFLKP YHKVYDELCA PTVFVSGDTL LVIGSTYEKN
FPIWMSTHPR TDDWTEAVDS FRAGAWDPAF FLDDDNRLYL YHGSSNTYPL YGQEVDRHTL
QPTGARQDLI RLHDDQHGWE RFGEYNDNNF MSPFMEGAWM NKHNGRYYLQ YGAPGTEFSG
YADGVYVSDH PLGPFSYQAH NPFSYKPGGF ARGAGHGATF QDKNKRWWHV STIVVNVKNN
FERRIGIWPA GFDKDGILYC NTAFGDYPHY LPGEPESGQF TGWMLLNYQH PVSVSSTYGA
FAANNAVDEN IKTYWCATTA NPGEWIQTDL GQTATVHAIQ INYADQDADI LGKRTDIYHQ
YRLWHSTDGK KWQLLCDKSR NKTDVPHDYI ALTQPVKTRY IKLENIHMAN GKFAISGLRI
FGKGNGPVPA AVNNFMVLRQ QSDKRNAWLK WYPSNDAYAY NIYYGIAPDK LYSSIMVYNA
SEYYLKALDK TTTYYFSIEA LGENGIGKRS PVIKIE
|
|---|
| |