| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1739 |
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| Symbol | |
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| ID | 8357889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2104030 |
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| End bp | 2108145 |
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| Gene Length | 4116 bp |
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| Protein Length | 1371 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644963926 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003121436 |
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| Protein GI | 256420783 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.665566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAT TCGTAACCAA CATTTTCAAA AACATGCAGG CAGCAGTCCG TACAGGCGCT
GCTGCCTGCT TACTCACACT GTGCGGCGTT AGCGCGATGG CTCAGGGACT GTCCAACAGA
GGTAAGGAAT TCTGGGTTGG TTATGGACAC CATCAGTTTA TGGAACCCGG CTTCACCAAT
AGTCAGAACA TGGTAGTGTA CCTGAGTGCC GAAGAAGCTG CTAACGTGAC TATAAGCATT
GATGGAACCG CATGGTCAAG AACATATAAT ATTCCCGCTA ACACCGTGAT CGTAAGCGAT
CTCATTCCTA AAGCCGGCTC TGTAGATGCG AGGCTGTATT CTGTACCGCC TTCTTATGGT
GGTACCGGTG GGGAAGGAGT CTTTAGCAAC AAAGGTATTC ATATCATAAG CGACGTACCG
ATCGTAGCTT ATGCACATAT TTACGGAAGC GTATCCTCCG GTGCTACAAT GCTGATGCCG
GTATCTACCT GGGGCTATTC TTATATCTCA TTAAATAGCC AGCAGAGCTT TGCAAATGAC
TGTTTTTCCT GGATGTATGT CGTCGCGAAG GAAGACAATA CGATGGTTGA GATTAACCCC
TCTGAGTCGA GCCGTAACGG ACGTCCAGCT AACGTACCGT TTACGGTGAC GCTCAACAGA
GGCGATATCT ACCAGCTGGT AGGTGCGCCG CTCGGTGGCG GTAAAGGAAA AGAACTGACA
GGTACGACTG TCCGCTCCAT CGCCAATGCA TCCGGTAAGT GTTTCCCCAT AGCCGTATTT
TCCGGTAGTA GCCGAACAAG TATCAATTGT CCGGGTAGTA CCGCAGGCAC CAGCGGAGAT
AATAATATGC AGCAGGTATT TCCCTATCAG GCATGGGGAA AACGTTACCT GACAGCTCCT
ATCTCCGGCA GAGTAGCCAC TAGTTTCCAG ACCAACTTAT ACAAAGTGGT CGTGAAAGAT
CCTTCTACTG TCGTAAAACG GAATGGTGTT GTACTGACGG GATTGTCTCA TTCCTGCTAC
GAGTTTATCA GCAACACCGC CGATTATATT GAAGCTGACA AGCCGGTATT ACTGGCGCAG
TTTATGGCCT CTCAGGGTGG TTGTCCGAAT ACTACCGGTA TAGGAGATCC TGAAATGATC
TATCTCAGTC CTATTGAACA GGCCACGAAG AAAGTAGCCT TCTACAGGAA TAATGTGGAA
AAGATCGAAG TAAACGGCCT ATTACTCGTG ATTCCTGACA ACGGTATTCC TTCGCTGAAA
ATAGATGGTC AGCCTACTTT TGATCTGAGT TATCCACATC CGAACCTGCC AGGATATACC
GTGGTAGTGA AACGCTGGAC AGCCGCCGCT GCACAATGTA CCGTACAGAG TGATTCGGCT
TTTAATGCTA CTACTTATGG TCTGGGTGAT TTTGAGAGCT ACGGATACAA TGCTGGTACT
TTTATCAATA ACCTGAATGC AATAGGGCAG ATCCACAATC AGGCCGATAC ATCCAGGGCA
ATGCATCCAT TCACCTGTGT GAATACGCCC CTGGATCTCT CTGTATTGCT GACCTATCAG
CCTACAAAAC TGGAATGGCA ACTGAGTAAA CTGGGCGCGA ATATCAACCC TGCTGCGGAT
GTTTTGCAAG ATTCACCGGC GCCTGCCAAA CAACTGGTGA TAGAAGGTGT ACAGTATTAC
CAATATACAT TACCACAGCC ATATAGATTT CCGAATGCCG GTTATTATGA TATTACCGTG
TTATCCACAG CGCCGCATAT TGACAACTGT AACAATACAG AAGAAGTCAA TTTCACAGTA
GCGGTGAAAG GGAAGCCAGA TGCCGTTGCT GCTTATACTT TCTCTACTGC CTGTGAACTG
GATACGGCGT ATTTCGCAGG TAAAGACAGC AGTAATGGCT ATAAATTGAC CCAATGGAAA
TGGGTTTTCC CGGGTGGTGT TACATCCGCT TTACAGCAGA CGGATCAGCA CCTGAATGCA
GGCACACAAG CCATCACGTT AGCAGTAGCT ACGGAAGATG GTTGTGTGGC AGATACAAGC
TTTAACCTGA CAGTTTATAA CAAACCGGTG GCAGATTTTG CCGCTACAAC GGCGGCAATC
TGCGCTGGTA GTACCGTTAC TTTCAATGAC AAGGCCGCCT ATGTAGGTAC TGCGCCAATA
AAAGAATGGA ACTGGGATTT TGGTAATGGT ACCAGTAAAA CGAATACCAC CAACGCTGCC
ACAACAGCGG CCTATACGGA CTACAAAACC TATACGGTCA GCCAGGTGGT GAAAGTAAGC
GACCTCTGTG TGAGCGATAC CGTAAAGAAA ACAGTGACGG TATACGCTGC GCCGGTAGCC
TCCTTTACCT ATCCGGATGA TTGTATCACA CAGGGTACAC CTGTACAGTT TACAAGTACT
GCAACTGCCT CTGACGGACA GGCAATAGCT ACTTATACCT GGGATTTCGG AGACGCCAAT
GCAACACCTG TCAATCCCAA TACATCAACT GTCAACAATC CTTTACATTC CTATACCTAC
TATGGTTCCT ATAAAATCCG GCACAGTGTG ACGACCGTAA ACGGTTGTGT GAAAGACACG
TTGGTAACAG CTACTTTCAA CGTAAAGCCT GTACTGACTT ATGCGAGTAT TCCAGCTGTT
TGCGAAAGCG TAAAGGGCAC CGTGTCCATT GCGCTTGCCG GGGTTACGAA TGGCGTGACC
GGGGCCGGTA TCTACCGGGG CCCGTATATT GATGCTGCCG GCAATTTTAA TCCGTCGGCA
GCCCGTGCCG GCACACATAC CGTCACATAT GTGTTCACTG CGGATAGCGG ATGTAAAGAC
TCTGTTACTG CCAACGTCAA TGTACTGCCT GCACCTCTTG CTGATTTCTC GCTTACTGCG
GATGTGTGCC TGGGAAGTGT AGTGACTATC ACCGATCAAT CTACGGTAGG CAGTGGTAGC
ATTATTACCT GGAACTGGCA GTTGGGAGAT GGTACGACTG CTACGCAGAA CAACAACAAC
CCTTTCAGTC AGCTGTATAC AGCCGCAGGT ACGTATGCCG TAAAACTGTC TGTCGTGAGT
GATAATGGCT GTGTAAGCGA TACCACTACC AAGAACGCTG TTGTACACGC ATTACCGGTC
GCCAATTTCA ATCCGTCTGC AGCGATCTGT ATGCCGGAGG GAAACGCAGT ATTTACCAAC
TTATCTACCG CCGCAAATAC TTATGAATGG AATTTCGGTG ATGGCAGTGC CACTGCTACT
GACAGAAACC CTTCACATGT TTTTACAACG GCAGGTAGCT ACAATGTGAC CTTATCGGTC
GTATCTGCTT ATGGCTGTAC ACATGATACC ACTAAAACAC TCAGCGCATT TTTCAATAAA
CCTACAGCTG CTTTTACAGC CTCTCCTGAT ACCTTATGTC AGGGTACAGA CAATTTCTTC
GCCGATAACA GTACAGTTGA TAATGGCGCT ATTAGTGCCT GGTCCTGGGA GTTTGGTGAT
GGTAGTTCCG ACAATATCGC GGACCCTGTG AAGCGATACC AGGAACCGGG TGCTTACACT
GTACAACTGA CGGTGACAAG TACTGCAGGT TGTATCTCCG AGCCATTTAC CGCACCGGTA
ACCGTGTATT TACAACCTGT AGTAGATGCC GGGCCTTCAT TCGTGGTAGC AGAAGGATCT
GTTGTACAAT TCGCACCTGT TGTAAATAAT GAAAACGAAC TCACTTTCAG ATGGACGCCT
GCTACTGATC TGTCCAATCC GGATATCCTG CGGCCTGTAC TGACCGTAAC AGCAGATGCG
GTATATACCC TGACTGCTAC CGGCCTTGGT GGTTGTACCG CCAGTGATGA CCTGTCTGTA
AAAGTATTCA AAGAAGTAAA AGTCCCCAAT GCTTTTTCTC CGAATGGAGA TGGCATCAAT
GATACCTGGG TATTGACCAA CCTGTCTGAT TACCCGGAGT GTTCTGTTGA AATCTTTAAC
CGTTATGGAC AGAAGATATT TCAGTCCACC GGTTATAAAA CAGCATGGGA TGGTACGATG
AATGGACATC CGCTGCCACT CGCTACTTAC TATTATGTCA TAAAAATAAA GAATGGATCT
GCGCCGCTGA CTGGTTATGT AGTGTTGGTG AGATAA
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| Protein sequence | MTTFVTNIFK NMQAAVRTGA AACLLTLCGV SAMAQGLSNR GKEFWVGYGH HQFMEPGFTN
SQNMVVYLSA EEAANVTISI DGTAWSRTYN IPANTVIVSD LIPKAGSVDA RLYSVPPSYG
GTGGEGVFSN KGIHIISDVP IVAYAHIYGS VSSGATMLMP VSTWGYSYIS LNSQQSFAND
CFSWMYVVAK EDNTMVEINP SESSRNGRPA NVPFTVTLNR GDIYQLVGAP LGGGKGKELT
GTTVRSIANA SGKCFPIAVF SGSSRTSINC PGSTAGTSGD NNMQQVFPYQ AWGKRYLTAP
ISGRVATSFQ TNLYKVVVKD PSTVVKRNGV VLTGLSHSCY EFISNTADYI EADKPVLLAQ
FMASQGGCPN TTGIGDPEMI YLSPIEQATK KVAFYRNNVE KIEVNGLLLV IPDNGIPSLK
IDGQPTFDLS YPHPNLPGYT VVVKRWTAAA AQCTVQSDSA FNATTYGLGD FESYGYNAGT
FINNLNAIGQ IHNQADTSRA MHPFTCVNTP LDLSVLLTYQ PTKLEWQLSK LGANINPAAD
VLQDSPAPAK QLVIEGVQYY QYTLPQPYRF PNAGYYDITV LSTAPHIDNC NNTEEVNFTV
AVKGKPDAVA AYTFSTACEL DTAYFAGKDS SNGYKLTQWK WVFPGGVTSA LQQTDQHLNA
GTQAITLAVA TEDGCVADTS FNLTVYNKPV ADFAATTAAI CAGSTVTFND KAAYVGTAPI
KEWNWDFGNG TSKTNTTNAA TTAAYTDYKT YTVSQVVKVS DLCVSDTVKK TVTVYAAPVA
SFTYPDDCIT QGTPVQFTST ATASDGQAIA TYTWDFGDAN ATPVNPNTST VNNPLHSYTY
YGSYKIRHSV TTVNGCVKDT LVTATFNVKP VLTYASIPAV CESVKGTVSI ALAGVTNGVT
GAGIYRGPYI DAAGNFNPSA ARAGTHTVTY VFTADSGCKD SVTANVNVLP APLADFSLTA
DVCLGSVVTI TDQSTVGSGS IITWNWQLGD GTTATQNNNN PFSQLYTAAG TYAVKLSVVS
DNGCVSDTTT KNAVVHALPV ANFNPSAAIC MPEGNAVFTN LSTAANTYEW NFGDGSATAT
DRNPSHVFTT AGSYNVTLSV VSAYGCTHDT TKTLSAFFNK PTAAFTASPD TLCQGTDNFF
ADNSTVDNGA ISAWSWEFGD GSSDNIADPV KRYQEPGAYT VQLTVTSTAG CISEPFTAPV
TVYLQPVVDA GPSFVVAEGS VVQFAPVVNN ENELTFRWTP ATDLSNPDIL RPVLTVTADA
VYTLTATGLG GCTASDDLSV KVFKEVKVPN AFSPNGDGIN DTWVLTNLSD YPECSVEIFN
RYGQKIFQST GYKTAWDGTM NGHPLPLATY YYVIKIKNGS APLTGYVVLV R
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