Gene Cpin_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1702 
Symbol 
ID8357851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2045809 
End bp2046399 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content43% 
IMG OID644963888 
ProductNusG antitermination factor 
Protein accessionYP_003121399 
Protein GI256420746 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00942091 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATG CATCCAATAA CCCTGCAGAA GAAACAAACA TTCCGACCCA GGACACCAAG 
TGGTACGTTC TGCGCGTAGT GAGTGGTAAA GAGAAAAAGG TTAAAGAATA CCTGGATATC
GAAGTACGCC GCTCCGATTG GGGTAACGTG ATCACCCAGA TATTTTTACC AGTAGAGAAA
GTCTACAAAG TGCAGGCAGG TAAAAAGGTG ATGCGCGAGA AAAACTTCTA CCCAGGGTAC
GTAATGATCG AAGCGATCGA TGGTAAAATG ACTGACGAAG TTATCCAATC CATCCGCAAC
GTATCAGGCG TTATTCATTT CCTGGGTAAA GATAAGCCAA TCGCCCTCCG TAAGGCTGAA
GTGAACAAGA TGTTAGGTAA AGTAGATGAA ATGTCTGATA ATGGACTGAC CATGAGCGAA
CCTTTCATCG TTGGTGAAAC AATCAAGATC ATTGATGGTC CTTTCAACGA CTTCAACGGT
ATTATCGAAG AGGTAATCGA AGACAAGAAG AAACTGAAAG TAACTGTAAA GATCTTCGGT
CGTGCAACTC CTGTAGAACT GAACTTCATG CAGGTAGAAA AAATCAGCTA A
 
Protein sequence
MIDASNNPAE ETNIPTQDTK WYVLRVVSGK EKKVKEYLDI EVRRSDWGNV ITQIFLPVEK 
VYKVQAGKKV MREKNFYPGY VMIEAIDGKM TDEVIQSIRN VSGVIHFLGK DKPIALRKAE
VNKMLGKVDE MSDNGLTMSE PFIVGETIKI IDGPFNDFNG IIEEVIEDKK KLKVTVKIFG
RATPVELNFM QVEKIS