Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1702 |
Symbol | |
ID | 8357851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2045809 |
End bp | 2046399 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644963888 |
Product | NusG antitermination factor |
Protein accession | YP_003121399 |
Protein GI | 256420746 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00942091 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGATG CATCCAATAA CCCTGCAGAA GAAACAAACA TTCCGACCCA GGACACCAAG TGGTACGTTC TGCGCGTAGT GAGTGGTAAA GAGAAAAAGG TTAAAGAATA CCTGGATATC GAAGTACGCC GCTCCGATTG GGGTAACGTG ATCACCCAGA TATTTTTACC AGTAGAGAAA GTCTACAAAG TGCAGGCAGG TAAAAAGGTG ATGCGCGAGA AAAACTTCTA CCCAGGGTAC GTAATGATCG AAGCGATCGA TGGTAAAATG ACTGACGAAG TTATCCAATC CATCCGCAAC GTATCAGGCG TTATTCATTT CCTGGGTAAA GATAAGCCAA TCGCCCTCCG TAAGGCTGAA GTGAACAAGA TGTTAGGTAA AGTAGATGAA ATGTCTGATA ATGGACTGAC CATGAGCGAA CCTTTCATCG TTGGTGAAAC AATCAAGATC ATTGATGGTC CTTTCAACGA CTTCAACGGT ATTATCGAAG AGGTAATCGA AGACAAGAAG AAACTGAAAG TAACTGTAAA GATCTTCGGT CGTGCAACTC CTGTAGAACT GAACTTCATG CAGGTAGAAA AAATCAGCTA A
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Protein sequence | MIDASNNPAE ETNIPTQDTK WYVLRVVSGK EKKVKEYLDI EVRRSDWGNV ITQIFLPVEK VYKVQAGKKV MREKNFYPGY VMIEAIDGKM TDEVIQSIRN VSGVIHFLGK DKPIALRKAE VNKMLGKVDE MSDNGLTMSE PFIVGETIKI IDGPFNDFNG IIEEVIEDKK KLKVTVKIFG RATPVELNFM QVEKIS
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