| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1700 |
|---|
| Symbol | |
|---|
| ID | 8357848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2044162 |
|---|
| End bp | 2045349 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644963885 |
|---|
| Product | translation elongation factor Tu |
|---|
| Protein accession | YP_003121397 |
|---|
| Protein GI | 256420744 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.174761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG AAACCTTTAA GCGGGATAAA CCCCACGTAA ACATTGGTAC CATCGGCCAC
GTTGACCACG GTAAGACTAC CTTGACTGCT GCCATTACCA ACATTTTGGC AAGCAAAGGT
CTGGCAGAGA AGAAAGGTTA TGATGAGATC GATGCCGCTC CTGAAGAAAA AGAAAGAGGT
ATTACCATCA ATACAGCACA CGTTGAGTAT CAGACAGCTA ACCGCCACTA CGCGCACGTT
GACTGTCCTG GTCACGCTGA CTATGTGAAA AACATGATCA CTGGTGCTGC GCAGATGGAC
GGTGCTATCC TGGTGGTTGC CGCTACAGAT GGTCCGATGC CACAAACTAA AGAACACATC
CTCCTGGCTC GTCAGGTAGG CGTTCCTCGT ATCGTTGTGT TCATGAACAA AGTAGACCTG
GTTGATGATC CTGAGCTGCT GGAACTGGTT GAACTGGAAA TCCGCGAACT GCTGAGCAAA
TATAACTACG ATGGTGATAA CACACCAATC ATCAAAGGTT CTGCAACCGG CGCTCTGGCT
GGTGAAGAAA AATGGGTATC TGCAGTTGAT GAACTGATGA ACGCAGTAGA TGAATACATC
CCACTGCCTC CTCGTCCGGT TGATCTGCCG TTCCTGATGT CTGTAGAAGA CGTATTCTCT
ATCACTGGTC GTGGTACTGT TGCTACAGGT CGTATCGAGC GTGGTAAGAT TAAAGTTGGT
GAGCCAGTTG AAATCGTTGG TCTGATCGAA AAACCACTGA CTTCTACATG TACTGGTGTT
GAGATGTTCA AAAAATTACT GGATGAAGGT GAAGCTGGTG ACAACGCTGG TCTGCTCCTC
CGCGGTATTG AAAAATCTCA GATCCGTCGT GGTATGGTTA TCGTTAAACC TGGTTCCATC
ACTCCGCACA CTGAATTCAA ATGTGAAGTA TACGTACTGA GCAAAGAAGA AGGTGGCCGT
CACACTCCGT TCTTCAACAA ATACCGTCCT CAGTTCTACT TCCGTACAAC TGACGTAACA
GGTGAAGTTG AATTACCAGC TGGTGTTGAA ATGGTAATGC CTGGTGATAA CGTAGGTCTG
ATCGTTAAAC TGATCGCTCC AATCGCTATG GAAAAAGGTC TGAAATTCGC TATCCGCGAA
GGTGGACGTA CCGTAGGTGC TGGTCAGGTT ACTGAAATCA TCAAGTAA
|
|---|
| Protein sequence | MAKETFKRDK PHVNIGTIGH VDHGKTTLTA AITNILASKG LAEKKGYDEI DAAPEEKERG
ITINTAHVEY QTANRHYAHV DCPGHADYVK NMITGAAQMD GAILVVAATD GPMPQTKEHI
LLARQVGVPR IVVFMNKVDL VDDPELLELV ELEIRELLSK YNYDGDNTPI IKGSATGALA
GEEKWVSAVD ELMNAVDEYI PLPPRPVDLP FLMSVEDVFS ITGRGTVATG RIERGKIKVG
EPVEIVGLIE KPLTSTCTGV EMFKKLLDEG EAGDNAGLLL RGIEKSQIRR GMVIVKPGSI
TPHTEFKCEV YVLSKEEGGR HTPFFNKYRP QFYFRTTDVT GEVELPAGVE MVMPGDNVGL
IVKLIAPIAM EKGLKFAIRE GGRTVGAGQV TEIIK
|
|---|
| |